Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01460 ATGTATGAAAGACTAACTGATATACTTATATATCAAAATGGAACCTTTAGATTCAAAGGACCCTGGTTCACTAGTCTCAATTGTATAGTAACCTCGGAACCGCAAAATGTAGAACATCTTCTCAAAACAAGGTTTACTAATTTCCCTAAAGGAAATTGTGTTAAAGACACAGTTTCTGATTTACTAGGAGACGGTATTTTCGCTGCAGATAATGAAACATGGCAGAAACAAAGAAAAACAGCGAGTATCGAGTTTCATTCAACAAAGTTTCGGAAATTAACAATTGAGTCATTGTTTGAGCTTGTGAATAATAGGCTCATACCTGTCTTAGATTCGTCTTTTAAGAAATCGGTTTCGATTGATCTTCAAGATATTTTGTTGAGATTAACTTTTGATAATGTTTGTATGATTGCTTTCGGTGTTGATCCTGGTTGTTTACAACCTCATTTACCTGTAATACCTTTTGCAGCAGCTTTTGAAGATGCAACAGAAGCTATTTTGCTTCGATTTCCGACGCTGGCTTGTGTATGGAAAACTATGAGGTTTCTTAACTTAGGTATAGAAAGAAAGTTGAAGAAATCAATACAAAAAGTTGATGAATTTGCTGATAATGTCATAAGTGAAAGAAAGAAAGAACTATCTTTGGAAAATGAACATGATGTTGATGATGATACGCGAAAATCGGATTTGTTAACTGTGTTTATGAGGCTTAAAGATGAGAATGGAATGGCTTATTCAGATAAGTTCTTGAGGGATATTTGTGTGAATTTTATATTAGCTGGGAGAGATACTTCTTCTGTTGCTTTAAGCTGGTTTTTCTGGTTAATTGATCAGAATCATGAAGTGGAGGAGAGAATATTAGAAGAGATTTGTAGGGTTGTGAGTGAGAGAGAGGAGATTAATAAGAAGGAAGAATTTGATAATAATTGTTTGAGATTCATGCCTGAGGAGATTAAGAAAATGGATTATTTGCACGCTGCTCTTTCAGAAGCTCTTAGATTGTATCCTTCTGTGCCTATGGATCATAAGGAGGTGGTAGAAGATGATAAATTTCCAGATGGAACAGAACTAAAGAAAGGAACAAAAGTGATATATGCAATATATTCAATGGGAAGAATGGAAAGCATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAAAGATGGTTAACTAAAGAAGGTAATTTCATAAGTGAATCTGCATACAAATTCACTGCTTTTAATGGAGGACCAAGATTGTGTTTAGGCAAAGATTTTGCATACTATCAAATGAAATATGTTGCAGCAAGTGTTATATTTCATTACCATGTTAAGGTTGTTGAGAATCACCCTATTGTTCCTAAGCTTTCTTTGACACTTTACATGAAGCATGGATTGAAAGTTAATCTTCATAGGCGTTGTGGTGAAGAGGTTGGTAAATATTTGAAGTTTAGTTAG 1437 0.3445 MYERLTDILIYQNGTFRFKGPWFTSLNCIVTSEPQNVEHLLKTRFTNFPKGNCVKDTVSDLLGDGIFAADNETWQKQRKTASIEFHSTKFRKLTIESLFELVNNRLIPVLDSSFKKSVSIDLQDILLRLTFDNVCMIAFGVDPGCLQPHLPVIPFAAAFEDATEAILLRFPTLACVWKTMRFLNLGIERKLKKSIQKVDEFADNVISERKKELSLENEHDVDDDTRKSDLLTVFMRLKDENGMAYSDKFLRDICVNFILAGRDTSSVALSWFFWLIDQNHEVEERILEEICRVVSEREEINKKEEFDNNCLRFMPEEIKKMDYLHAALSEALRLYPSVPMDHKEVVEDDKFPDGTELKKGTKVIYAIYSMGRMESIWGKDCLEFKPERWLTKEGNFISESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASVIFHYHVKVVENHPIVPKLSLTLYMKHGLKVNLHRRCGEEVGKYLKFS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01460 478 PRINTS P450 superfamily signature 326 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 PRINTS P450 superfamily signature 260 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 PANTHER CYTOCHROME P450 2 461 - -
Trre1g01460 478 Pfam Cytochrome P450 25 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 CDD CYP86A 16 459 - -
Trre1g01460 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Trre1g01460 478 PRINTS E-class P450 group I signature 269 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 PRINTS E-class P450 group I signature 325 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 PRINTS E-class P450 group I signature 249 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 SUPERFAMILY Cytochrome P450 21 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01460 478 FunFam Cytochrome P450 1 469 - -
Trre1g01460 478 Gene3D Cytochrome P450 10 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01460 Trre-Chr1 11105130 11107251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01460 1 474 Cytochrome P450 AT5G23190 69.198 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01460 K15402 - gmx:100809503 737.643