Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01454 ATGGACACACTCAACTCCATACTCCTCATTCTCTTCACCTTCATCTTCCTCAAATTCTTCCATTCTCTTCTCTCAAAACAAAAACCACCACTTCCACCAGGTCCACGTGGCATTCCCATCATAGGAAACCTCCATCAACTAGGCCCAAACCCCCACAAAACCTTAACCAATCTCTCCAAAATCCATGGCCCAATAATGTCCTTAAAATTGGGCCAAATAACTACCATTGTTATGTCTTCACCACAAACTGCCAAATCTGTTCTTCAAACCAATGACCAATTTCTTTCTAATAGGAAAGTACCTGATGCCATGAAAGGTGCTAACCATCATAATTATAGTTTACCATTTTTACCTATTTGTCAACGTTGGAAAGACCTAAGAAAAACATGCAACAACCTTTTATTTTCGAACAAAAACCTCGATTCGAATCAAGCACTTCGAAGCCAGAAGATTATAGAACTTTATGATGAAATAAATGATAGTGCTACAAAATATGAAGCAGTTAATATAGGAAGATTGGCTTTTAAGACGACTATTAATATGTTGTCGAATACGGTTTATTCAGTTGATTTGGTTCGATCGAGTGATAAAGCCGGAGAGTTTAAGGAGTTGGTTACTAAGATAATGAAGGAAGTTGGAAGACCGAATATCGCGGATTGTTTTCCGGTTTTGAAGGTTTTGGATCCTATTGGGATTAGAGGAAGGGTTGGTGAGTATTTTGGGAAGTTGTTGGAGATTTTTGGAGAGTTGGTTGATCAAAGATTGAAGATGAGGGAGTTGAAAGGTTATTGTATGAAAAGTGATTTGTTGGATGCTATGCTTGATGATGAGAATAATATTGGGGAGAAGTATAAAGATAAGATTGAACGTTTATCTGTGGACTTGTTTGTTGCTGGAACCGACACGGTAACTTCGACAATAGAATGGGCAATGGCTGAATTACTTCACAATCCAAAAGTTATGTCAAAAGCAAAAGCAGAGTTAAACCAAATTATTGGCAAAGGAAACTTAGTAGAAGAATCAGACTTAACAAAACTCCCTTATTTACAAGCAATAGTAAAAGAAACTTTTAGATTACATCCAGCAGTTCCACTTTTACTACCAAGAAAAGCTGAAAATGACTTAAAAATTAATGGCTATAAAGTCCCAAAAAATGCACAAGTTTTAATTAATGTTTGGGCTATTGGAAGAGATTCAAATTTATGGGACAATCCTAATGAATTTTTGCCTGAAAGATTTTTAGGGTCAGATATTGATTTTAAAGGTACAAATTTTGAGTTGACACCATTTGGTGGTGGGAGAAGATTATGTCCTGGATTACCATTAGCTATAAGGATTTTATTTTTAATGTTGGGTTTGTTTATTAATTGTTTTGATTGGGAACTTGATGGTGGGATTAAAGTTGAGGATATGAATATGGATGATAAATTTGGACTTACTTTGGAGAAGGCTCAAGCTTTGTTAGCTGTTCCAATTAAAGTATAA 1485 0.3562 MDTLNSILLILFTFIFLKFFHSLLSKQKPPLPPGPRGIPIIGNLHQLGPNPHKTLTNLSKIHGPIMSLKLGQITTIVMSSPQTAKSVLQTNDQFLSNRKVPDAMKGANHHNYSLPFLPICQRWKDLRKTCNNLLFSNKNLDSNQALRSQKIIELYDEINDSATKYEAVNIGRLAFKTTINMLSNTVYSVDLVRSSDKAGEFKELVTKIMKEVGRPNIADCFPVLKVLDPIGIRGRVGEYFGKLLEIFGELVDQRLKMRELKGYCMKSDLLDAMLDDENNIGEKYKDKIERLSVDLFVAGTDTVTSTIEWAMAELLHNPKVMSKAKAELNQIIGKGNLVEESDLTKLPYLQAIVKETFRLHPAVPLLLPRKAENDLKINGYKVPKNAQVLINVWAIGRDSNLWDNPNEFLPERFLGSDIDFKGTNFELTPFGGGRRLCPGLPLAIRILFLMLGLFINCFDWELDGGIKVEDMNMDDKFGLTLEKAQALLAVPIKV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01454 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Trre1g01454 494 SUPERFAMILY Cytochrome P450 32 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 Pfam Cytochrome P450 32 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 FunFam Cytochrome P450 76C4 23 490 - -
Trre1g01454 494 CDD CYP76-like 59 491 - -
Trre1g01454 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 493 - -
Trre1g01454 494 Gene3D Cytochrome P450 21 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01454 494 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01454 Trre-Chr1 11035211 11037317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01454 8 493 Cytochrome P450 AT2G45550 46.386 7.55e-166 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01454 - - lja:Lj2g3v0039250.1 638.647