Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01443 ATGTTGAATGTGTTGGCTAGCTATTCTCTTCTCAATTGTTCAATTCATACAAATGAAGATGGTAAAAGAGAAAGAGTTTTTGCTCTTTCTTCAATTGGTCAATACTTTGCATATGATAAAGATGGAGGCTCTTTGGGTCCACTCTCAACATTAATCCATAGAGGATGTAACACTGTTTGGGATGATGCAAAGGAAGCAATTTTGGATCCTGATGTGAAAACTCTTTTCCAAAGTATCAATGGGACATCATTTTATCAATATACAAAGACAAATATTGAATTGAATGATATTACTGACAAAGCAATGGCCCATTCTGGTTCATTAGAAATGAAAAGGGTCCTTACACTATATAAAGGTTTTGAGGGAGTCTCAACATTGGTTGATGTTGGAGGTGGATTAGGAGAGACCTTAAAAGTTATTATATCTCAATATCCTTCCATTAAAGGAATTAATTTTGATTTGCAACAAGCCGTTCGAGACGCACCTTCTTATCCAGGGATAGAGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTACTAAAGCTTGTATGTCATAATTGGGGAGATGAAGAATGTGTGAAATTTTTAAAAAATTGTCACAAAGCTTTGCCAAAATATGGGAAAGTGATTATTTTGGATTATATCATTCCTGAGGTGCCAAATCCAAACAATATGTCTAAGCATGTTTGTGATATTGACAATCTCATGTTTTTAATAACAACTGGCAAGGAAAGAACTGAAGAAGAATTTGAGAGCTTATGTAAGAAATCTGGATTTTCTAAATTTCATGTTGCTTGCAGTGAATTCTCAGCCATGTCAGGAGTGATGGAATTTTATAAATAA 861 0.3449 MLNVLASYSLLNCSIHTNEDGKRERVFALSSIGQYFAYDKDGGSLGPLSTLIHRGCNTVWDDAKEAILDPDVKTLFQSINGTSFYQYTKTNIELNDITDKAMAHSGSLEMKRVLTLYKGFEGVSTLVDVGGGLGETLKVIISQYPSIKGINFDLQQAVRDAPSYPGIEHVGGDMFESVPTGDAILLKLVCHNWGDEECVKFLKNCHKALPKYGKVIILDYIIPEVPNPNNMSKHVCDIDNLMFLITTGKERTEEEFESLCKKSGFSKFHVACSEFSAMSGVMEFYK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01443 286 Pfam O-methyltransferase domain 60 266 IPR001077 GO:0008171
Trre1g01443 286 Gene3D Vaccinia Virus protein VP39 95 273 IPR029063 -
Trre1g01443 286 Gene3D - 2 113 IPR036388 -
Trre1g01443 286 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 56 273 IPR029063 -
Trre1g01443 286 PANTHER O-METHYLTRANSFERASE 1 275 IPR016461 GO:0008168
Trre1g01443 286 FunFam Uncharacterized protein 38 286 - -
Trre1g01443 286 CDD AdoMet_MTases 125 222 - -
Trre1g01443 286 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 286 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01443 Trre-Chr1 10873267 10875093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01443 1 275 Monolignol Biosynthesis Gene Families AT5G54160 45.848 1.20e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01443 - - aprc:113869089 405.216