Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01433 ATGAATGTGCATCACATCACCAGCAAGAATTTCAACAACTATGGAAAAGGGTCTGATTTCCATGAGATTTTTGAAGTTCTTGGTGTTGATATTGCTTATTTAAAAGCTATTTCAGTGCTTGAGGATATGATATTGTTGAGGCATTATCTTCCAAAATGTATTTGGAAGCTACAAAAATGGTTAAAAATTGGTCAAGAGAAGAAGGGCAAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCGCCAAAATTATTCAAGAAATAAAAGATAAATGTTTAACACAAGAGAAGAATTCGATCACGGATTTAAGTGTTCAAGAGCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTCTAGCATTTCAACACAAATGTGCAATCAATGATGATATACTACCTAGTGGGCACTATGTTAGTCCAAATACAAAGTTAATATACTCTTTGTATGCAATGGGAAGGATGGAACAAATTTGGGGACAAGATTGTTTTGAATTTAAGCCGGAGAGATGGATATCAAATAAAGGACAAATTATACATATACCATCTTACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTCTTGGGAAAGATATTAGCTTTGTTGAAATGAAAATGGTTGCAGCTTCAATATTATGGAAGTTTCATATACAAGTTGTAGAAGGTCACTCTGTAACTCCAAAGATTTCTATTGCTCTTCGCATGGAACATGGCCTTAAGGTCAAAATTAATAAAAGATGTGATTGA 798 0.3471 MNVHHITSKNFNNYGKGSDFHEIFEVLGVDIAYLKAISVLEDMILLRHYLPKCIWKLQKWLKIGQEKKGKFRSQLVLLACFNSSYCRSAKIIQEIKDKCLTQEKNSITDLSVQELDKLVYLHGAICEALRLYPPLAFQHKCAINDDILPSGHYVSPNTKLIYSLYAMGRMEQIWGQDCFEFKPERWISNKGQIIHIPSYKFIAFNAGPRSCLGKDISFVEMKMVAASILWKFHIQVVEGHSVTPKISIALRMEHGLKVKINKRCD 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01433 265 Gene3D Cytochrome P450 88 263 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01433 265 PRINTS E-class P450 group IV signature 118 134 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01433 265 PRINTS E-class P450 group IV signature 169 187 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01433 265 PRINTS E-class P450 group IV signature 211 229 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01433 265 PRINTS E-class P450 group IV signature 195 211 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01433 265 Pfam Cytochrome P450 90 247 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01433 265 PANTHER CYTOCHROME P450 33 70 - -
Trre1g01433 265 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 204 213 IPR017972 GO:0005506|GO:0016705
Trre1g01433 265 SUPERFAMILY Cytochrome P450 90 263 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01433 Trre-Chr1 10814378 10815667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01433 89 265 Cytochrome P450 AT2G23180 53.672 8.49e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01433 - - cam:101494575 285.419