Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01432 ATGACCTTGTTTCATTATATTACATTATTTTTAGCCGCCAGTCTCTTCATCATTTTATACAATATATGGAGACGCAACAAAAATGTACTTTCACCAAATTGGCCAATAATTGGCATGCTACCATCACTTTTATATAATCAATCCAATATGCATGATTTTACAGCCTTACTTTTGAAACATTATGGTGGCACATTTCATTTTAAAGGACCTTGGTTCACAAATATTGCCAACTTTACCCTCACCGGTGATCCCATGAATGTGCACCACATCCTCAGCAAGAATTTCACCAACTATGGAAAAGGATCTGATTTCCATGAGATTTTTGAAATTCTTGGTGCTGGTATTTTCAATTTGGATAATAATGAATGGAAACAAGAAAGGACACTACTTCATTCAATTCTCAAAAAGAAAAACTTTGAGATATTCAATCAACAAAACATTCAAAAGAAGCTAGAGAATTGCCTATTACCATTTCTTGATCAAGCATCCAAAGGTAAACAAGTACTTGATTTACATAATATTATTGAGAGATTCACCTTTGATGTTACTTGTACTTTTATCTTTGGATTCGATCCAAATTGTCTTTTCAAATTCGATGAGATATCTGATGTTAATTCTTGTGTAAAAGCTATTTCTGTGATTGAGGATATGTTATTGTCTAGACACTGTATTCCAAAGTATATTTGGAAGCTCGAAAAATGGCTACAAATTGGTCAAGCTAAGGAGAATAAGGTAGCTCAAGAAAATGTTTATCGATTCTTAAACAACTGTATATCTTCCTACAAAGATGATGAAGCGGAAGACGAATCTCCTTCAAGCGTATTAAAAGAACTAATGAAAGAAGGATTGGGAAAGGGTGAAATGACTAAGGAGTATATTAGAGACACGGCACTAAATCTCTTGGCGGCTGGAAATGGAACAGTCAGTTCTGGTATCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCTAAAATTATTCAAGAGATCAAAGATAAATGTTTAACACAAGAAAAGAATTCGATCACGGATTTAAGTGTTCAAGAGCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTATACCATTCGAACACAAGTGCGCAGTTAAATCCGATATACTACCTAGCGGAGACCATATTAGTCCAAATACAAAGTTAATATATTCTTTGTACGCGATGGGAAGATTGGAGCAAATATGGGGTGACGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCAGATAAAGGACAAATTATACAAGTTCCGTCTTATAAGTTCATTGCATTCAATGCAGGTTCAAGAAGTTGTATTGGGAAAGATATAACTTTTGTTGAAATGAAAATGGTTATAGCTACAGTGCTGTGGAAGTTTCACATACATCCAGTGGAAGGTCAATCTATCGTTCCTAGGGTTTCTATGGTTCTTCGTATGAAACATGGATTTAAGGTCAATGTTAGTGAAAGATGCATTTGA 1512 0.3485 MTLFHYITLFLAASLFIILYNIWRRNKNVLSPNWPIIGMLPSLLYNQSNMHDFTALLLKHYGGTFHFKGPWFTNIANFTLTGDPMNVHHILSKNFTNYGKGSDFHEIFEILGAGIFNLDNNEWKQERTLLHSILKKKNFEIFNQQNIQKKLENCLLPFLDQASKGKQVLDLHNIIERFTFDVTCTFIFGFDPNCLFKFDEISDVNSCVKAISVIEDMLLSRHCIPKYIWKLEKWLQIGQAKENKVAQENVYRFLNNCISSYKDDEAEDESPSSVLKELMKEGLGKGEMTKEYIRDTALNLLAAGNGTVSSGISWFFWLVSTHPIVEAKIIQEIKDKCLTQEKNSITDLSVQELDKLVYLHGAICEALRLYPPIPFEHKCAVKSDILPSGDHISPNTKLIYSLYAMGRLEQIWGDDCLEFKPERWISDKGQIIQVPSYKFIAFNAGSRSCIGKDITFVEMKMVIATVLWKFHIHPVEGQSIVPRVSMVLRMKHGFKVNVSERCI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01432 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Trre1g01432 503 Pfam Cytochrome P450 32 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 SUPERFAMILY Cytochrome P450 20 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 CDD CYP86A 65 494 - -
Trre1g01432 503 Gene3D Cytochrome P450 16 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 PANTHER CYTOCHROME P450 22 496 - -
Trre1g01432 503 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01432 503 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01432 Trre-Chr1 10810410 10811921 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01432 1 501 Cytochrome P450 AT2G23180 39.072 4.04e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01432 - - cam:101494575 676.781