Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01429 ATGAAGGAAGGGTTGGGAAAGGGCAAAAAGGCCGAGGAGTATATTAGAGACACAACACTATGTCTCTTAACGGCTGGAAATGGAACGGTTAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCTAAAATTATTCAAGAGATCAAAGATAGTTGTTCTATACAAGAGGAGAATTTTGTCACAAATTTAAGTTTCGAAGTGCTTGAAAAGTTAGTTTACCTTCATGGAGCTATAAGTGAAGCCTTAAGGCTTTATCCTCCTCTAGCATTTCAACACAAATGTGCAATCAAATCTGATGTTCTACCTAGTGGACACCATGTTAGTCCAAATACAAAGTTAATATTCTCTATGTATGCAATGGGAAGAATGGAACAAATATGGGGACAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATATCAGATAGAGGACAAATTATAAAAGTACCATCTTACAAGTTCATGGTAGTCAATGCAGGTCCTAGAAGTTGTATTGGTAAGGATATTAGCTTTGTTCAAATGAAAATGGTTGCAGCTACATGTACACTGTTGTGGAAATTTCACATAGAGGTGGTGGAAGGTCATTCTGTAACTCCAAGGGCTTCTAGTGTCATTCGCATGAAACATGGCTTGAAGGTCAAAGTTAGTAAAAGATGCATTTGA 684 0.3787 MKEGLGKGKKAEEYIRDTTLCLLTAGNGTVSSGLSWFFWLVSTHPIVEAKIIQEIKDSCSIQEENFVTNLSFEVLEKLVYLHGAISEALRLYPPLAFQHKCAIKSDVLPSGHHVSPNTKLIFSMYAMGRMEQIWGQDCLEFKPERWISDRGQIIKVPSYKFMVVNAGPRSCIGKDISFVQMKMVAATCTLLWKFHIEVVEGHSVTPRASSVIRMKHGLKVKVSKRCI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01429 227 PRINTS E-class P450 group IV signature 171 189 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 PRINTS E-class P450 group IV signature 16 42 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 PRINTS E-class P450 group IV signature 78 94 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 PRINTS E-class P450 group IV signature 129 147 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 Pfam Cytochrome P450 12 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 PRINTS P450 superfamily signature 171 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 PRINTS P450 superfamily signature 25 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 PRINTS P450 superfamily signature 162 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 PRINTS P450 superfamily signature 83 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 Gene3D Cytochrome P450 2 226 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01429 227 PANTHER CYTOCHROME P450 10 220 - -
Trre1g01429 227 SUPERFAMILY Cytochrome P450 8 225 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01429 Trre-Chr1 10783071 10786011 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01429 12 225 Cytochrome P450 AT2G23180 50.935 5.01e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01429 - - cam:101494575 330.872