Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01423 ATGGCTTTGTTTCATTATATTACATTATTTGTAGCCACTCTCTTCATCATATTCTACTATATGTGGAGACACCATAGAGATATATTAATATCAAATATTCCAATACTTGGCATACTACCATCAGTTTTACATAATCAATCCAATATTCATGATTATGTAACCTTAGGATTTAAACATTATGGAAGCACTTATCGTATTAAAGGACCTTGGTTCACAAACATTGCCAATTTTATCCTCACTAGTGATCCTACGAATGTGAACCACATCACTAGCAAGAATTTTAGCAACTATGGGAAAGGATCTGATTTTCATCAAATATTTGAAGCTCTTGGTGTTGGTATTTTCAATTTGGATTTCAATGAATGGAAACAAGAGAGGACAAGGCTTTATTCATTGCTCAAATTGAAAAGCTTTGAGATAATTTTTCAACAAATTATTCAAAAGAAGCTAGAGAATTGCCTCTTACCATTTCTTGATCATCATGCTTCTAAAGGTGTACAAGTACTTGATTTACAAGATATTCTTGAGAGATTCACCTTTGATATTACTTCCACTTCGTTATTTGGATTCGATCCTAATTGTCTTCCTTACAAGTTCGATGAATTCTCCGAGATAAATTATCTAAAAGCTGTTTCTGTGCTTGAGGATACACAATTTAAAAGGCACTATATTCCTAAATGTATTTGGAAGATGCAAAAATGGCTACAAATTGGTCAAGAGAAGAAGAACAAGGTAGCTCAAGAAAATCTTCATCAATTCTTGTCCAAGTGTATACTTTATTTAAAAGGCGATGAAGAGAAAACAAGATCGAGAAGCGGTGAAGATGTTGATGAAAGGAATTCTTGCTTGCTAAATGCGCTAAAAATAAAGGAAGGTTCGGTTGAGAATGAGAAGTATATTAGAGACACTGCATTAAATCTCTTGGGTGCGGGAAATGGAACAATTAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATCATCGAAGCCAAAATCATTCAAGAGATCAAAGATATTTGTCTAACACAGGACGCAAATTTGATCAATAATTTAAGTCTAGAAAAACTTGATAAGCTAGTTTACCTTCATGGAGCCATATGTGAAACCTTAAGGCTTTATCCTCCTGTGCCATTTCAACACAAGTGCGCAATCAAATCCGATATACTACCTAGTGGAGACCATGTTAGTCCTAATACAAAGTTGATATTCTCTATGTATGCAATGGGGAGATTGAAACGAATATGGGGTAAGGATTCCTTGGAATTTAAGCCGGAGAGATGGATATCAGATAAAGGACAAATTATACATGAACCATCTTATAAGTTCATAGCATTTAATGCAGGTCCTAGAAGTTGTCTTGGGAAAGATATTAGTTTTGTTCAAATGAAAATGGTTGCAGCTGCTATGTTATGGAATTTTCGTATACAAGTTGTGGAAGGTCATTCTGTAACTCCAAGAATTTCTATTCTTCTTCGTATGAAACATGGCTTGAAGGTCAAAGTTAGTAAAAGATGCATTTGA 1533 0.3438 MALFHYITLFVATLFIIFYYMWRHHRDILISNIPILGILPSVLHNQSNIHDYVTLGFKHYGSTYRIKGPWFTNIANFILTSDPTNVNHITSKNFSNYGKGSDFHQIFEALGVGIFNLDFNEWKQERTRLYSLLKLKSFEIIFQQIIQKKLENCLLPFLDHHASKGVQVLDLQDILERFTFDITSTSLFGFDPNCLPYKFDEFSEINYLKAVSVLEDTQFKRHYIPKCIWKMQKWLQIGQEKKNKVAQENLHQFLSKCILYLKGDEEKTRSRSGEDVDERNSCLLNALKIKEGSVENEKYIRDTALNLLGAGNGTISSGLSWFFWLVSTHPIIEAKIIQEIKDICLTQDANLINNLSLEKLDKLVYLHGAICETLRLYPPVPFQHKCAIKSDILPSGDHVSPNTKLIFSMYAMGRLKRIWGKDSLEFKPERWISDKGQIIHEPSYKFIAFNAGPRSCLGKDISFVQMKMVAAAMLWNFRIQVVEGHSVTPRISILLRMKHGLKVKVSKRCI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01423 510 SUPERFAMILY Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 CDD CYP86A 67 501 - -
Trre1g01423 510 Pfam Cytochrome P450 32 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 PANTHER CYTOCHROME P450 20 503 - -
Trre1g01423 510 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 Gene3D Cytochrome P450 28 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01423 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01423 Trre-Chr1 10733808 10735340 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01423 1 508 Cytochrome P450 AT2G23180 42.802 4.82e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01423 - - cam:101494575 671.774