Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01412 ATGACCATGTTTCAGTATATTACATTATTTGTAGCCATTCTTTTCATACTATTCTACAATATATTGAAACGCATCAACAAAAATGTACTTGTACCAAATTGGCCAATAATTGGCATGCTTCCATCAGTTTTGCATAATCAATCCAATATTCATGATTATGTAACCTTACTTTTGAAACATTATGGTGGAACTTTTCATTTTAAAGGACCTTGGTTCACAAACATTGCCGATTTTATCCTAACCACTGACCCCATGAATGTGCACCATATCACCAGCAAGAATTTCACCAACTATGGAAAAGGGTCTGATTTTCATGAGATCTTTGAAGTTTTTGGTCTTGGTATTTTCAATTTGGATTTCAATGAATGGAAACAAGAGAGAGCATTGTTTCATTCATTGCTCAAAAGGAATAGTTTTAAGATATTCCTTGAACAAAACATTCAAAAGAAGTTAGAGAATTGCCTATTACCAATTTTGGATCATGCATCCAAAAGTGAACAAATACTTGATCTACAAGATATTCTTGAGAGGTTCACCTTTGATATTGCTTTCACTTCTTTATTTGGATTTGATTCCAATTGCCTTCCTTACAATATCAACGAGTTCGAAGAGATTGCTTATGTAAAAGCTATTTCTGTGCTTGAGGATATGATATTGATGAGGCACTATATTCCAAATTGTATTTGGAAGTTTCAAAAATGGCTAAAAATTGGTCAAGAGAAGAAGGGAATGGTAGCTCAAAAGAATCTTTACGAATTCTTGAACAAGTGTATCGCTTATTATAAAGGCGGTGAAGAAAAAAGAAGATTGAGAAGCAATGAATATATGGATGAATCAAATTCTTGCTTGCTTAAAGAACTAATGAAGGAAGGAATATTGGAAAAGGGTGAAATGGTTGAGAAATACATTAGAGACACTGCAATTAATCTTTTGCTTGCAGGAAATGGATCAGTTAGTTCAAGTCTCAATTGGTTCTTTTGGCTTGTTTTAACTCATCCTATTGTGGAAGCTAAAATTATTCAAGAGATAAAAAATAATTGTCTAACACATGAAAAAAATTTGATCACAAGTTTAAGTGTTCAAGAGCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAGCATTAAGGCTTTATCCTCCTATAGCATTTGAACACAAGTGTGCAATTAAATATGACATTCTACCTAGTGGAGATCAGGTTAGTCCAAATAAAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGAGAAGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCAGATAGAGGTCAAATTAAGCACGTACCATCTTACAAGTTCATAGCATTTAATGCAGGTCCTAGAAAGTGTATAGGGAAAGATATGAGCTTTGTTCAAATGAAAATGGTTGCAGTTGCATTGTTATGGAAGTTTAAGATACAAGTGGTGGAAGGTCACTCTATAACTCCAAGAGCTTCTATTGTTATTCGTATGAAAAATGGATTTAAGGTCAAAGTCAATAAGAGATGCATTTGA 1542 0.3333 MTMFQYITLFVAILFILFYNILKRINKNVLVPNWPIIGMLPSVLHNQSNIHDYVTLLLKHYGGTFHFKGPWFTNIADFILTTDPMNVHHITSKNFTNYGKGSDFHEIFEVFGLGIFNLDFNEWKQERALFHSLLKRNSFKIFLEQNIQKKLENCLLPILDHASKSEQILDLQDILERFTFDIAFTSLFGFDSNCLPYNINEFEEIAYVKAISVLEDMILMRHYIPNCIWKFQKWLKIGQEKKGMVAQKNLYEFLNKCIAYYKGGEEKRRLRSNEYMDESNSCLLKELMKEGILEKGEMVEKYIRDTAINLLLAGNGSVSSSLNWFFWLVLTHPIVEAKIIQEIKNNCLTHEKNLITSLSVQELDKLVYLHGAICEALRLYPPIAFEHKCAIKYDILPSGDQVSPNKKLIYSLYAMGRMEQIWGEDCLEFKPERWISDRGQIKHVPSYKFIAFNAGPRKCIGKDMSFVQMKMVAVALLWKFKIQVVEGHSITPRASIVIRMKNGFKVKVNKRCI 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01412 513 CDD CYP86A 65 504 - -
Trre1g01412 513 Gene3D Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Trre1g01412 513 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 PANTHER CYTOCHROME P450 21 506 - -
Trre1g01412 513 Pfam Cytochrome P450 32 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01412 513 SUPERFAMILY Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01412 Trre-Chr1 10657400 10658941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01412 1 511 Cytochrome P450 AT2G23180 41.714 1.41e-146 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01412 - - cam:101494575 713.761