Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01410 ATGCTAACTGTTATGATGTTGTTTGATGGCATTAATTGGAAAATTGCTACACTGAGAAGTTCAACAATGAGCAGGAATTTGAGTCCTGTGCTGCGAAAACAGCTTGAAAATCTCGACAAAGATGTTGACAATCGTAAATCTGCATTGATAGCAGAAGAGACAGAAGCAGATAATGAGAGGTTGGAGAAGGATTTGGAGGAAATAAAGCTACAAATTGAAGAACTAAAGAAGATTTTGGTTATACTCATAAAGACATATGGAAATGGGAAGACTACTATTTCAATATATGAAAGGAAAGCAAGCATAAGACAATTTTATTCGGTTATATTTCCTGCTCTATTGCAACTTCAAATGGGCATCACAGATTTGGATGAAAGGGGACTGCATCAGAATCTTTCTGGTGTTTGGAAGAAGCAGAGGATAAAAGTACTCAAGAGGGTTTTTCGTTTGAAACGGGGAATGATCCACATACAATTAATTTTTTATCTTAAACAAAAGGGAATCAAGTTAAGTGATGAAACAAGCTCACAAGATTTTGAAGATAACTATCAGTCCAAGACTGATTTGCTCAAAGCCGTTGCGATATTTGTCGCGGCTGCAACTGGGACAGTTGCAATTAACCATTCTTGGGTTGCTGCAAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAATCTTTAGCATTCAACAAAAGTGGGGTAGGACTATTGATGGCTGTAAGCTTATGGGTGATAAGGAGTATTGGGGTAAATATCTATCTTTTATATGTTTTGGCTTTTGAGAATGTCAGATAA 822 0.3662 MLTVMMLFDGINWKIATLRSSTMSRNLSPVLRKQLENLDKDVDNRKSALIAEETEADNERLEKDLEEIKLQIEELKKILVILIKTYGNGKTTISIYERKASIRQFYSVIFPALLQLQMGITDLDERGLHQNLSGVWKKQRIKVLKRVFRLKRGMIHIQLIFYLKQKGIKLSDETSSQDFEDNYQSKTDLLKAVAIFVAAATGTVAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGVNIYLLYVLAFENVR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01410 273 Coils Coil 51 85 - -
Trre1g01410 273 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 171 259 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01410 Trre-Chr1 10648296 10651983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01410 172 258 Antiporters AT3G19490 81.609 3.80e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01410 - - cpap:110810493 156.762