Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01339 ATGATATCTTTAGAACAATCTTCCACAACCACCACCAACAACCAGCAAGAGCTCCCACTAAAAGCAATCCCAGGCAGCTATGGCCTCCCATTCATCGGACCGATTTTCGACCGACACGACTATTTCTACAACCAAGGTAGAGACAAATTCTTCTCAACAAGAATTCAAAAATACAATTCAACAGTCTTCAGAACCAACATGCCACCAGGTCCATTCATAGCCTCAAACCCTAGAGTCATAGCTCTCTTAGACGCCGAATCCTTCCCGATCCTCTTTGACAATAAAAAAGTCGAGAAACACAATGTCTTCGACGGTACCTTCATGCCATCGACAAATTTCACCGGCGGCTACCGTATCTTGTCTCAATTAGACACAACTGAACCAAACCATGCTCTTATCAAAGGTTTATTGCTTAATGCTCTTTTGTCAAGAAAAGACAGTATTATCCCTCTTTTTAAGAGGATACTTTCTGATTCTTTTAATAAGATTGAAGATGAAATTTCTGGTAAAAGTGGTAAAGCAGATTTTAACACTATTTTTAGTGAAGCTTCTTTTAACTTCTTGTTTAATCTCTTTTGTGATAATAAGTATCCTTCTGAGACTATCCTTGGTTCACAAGGTCCTAAAATGTTGGACACATGGATTCTCTTTCAAATTGCTCCAATTGAAACATTAAAACCTCCTAAGATTTTCAATTATCTTGAAGATCTATTGCTTCGTACTGTTCCCATTCCAGCTTGTTTAACAAGGTCCTCTTACAAGAAGCTCTATGAAGCATTTTCTTCTTCAGCTGTAACAATTTTAGATGAAGCCGAAAAAGTAGGGTTGAAAAGAAGTGAAGCATGCCATAATCTCATTTTCATAGCAGGCTTCAATGGATATGCCGGATTGAAGAATCAATTTCCAACACTCTTCAAATGGATAGCTTTATCTGGTAAAGAGCTACACAAAGAACTCGCGAACGAGATAAGAACCGTTGTAAAACAAGAAGGCGGAGTAACAATTCAATCGTTGGAAAAAATGTCGTTAGTAAAATCCGTTATTTATGAAGCAATGCGAATAGCACCTGTTGTACCTTATCAATATGCAAAAGCAAGAGAAGATTTTATTGTGAAGAGTCATGATGCAAGTTTCGAAATAAAAAAGGGTGAGACGATATTTGGATACCAACCTTTTGCTACTAAGGATCCTAGGGTTTTCGATGATGCCGAGGTTTTCGTTCCAAAGAGGTTTATCGGAGAAGGTGAGAAGTTGTTGAAGTATGTTTTATGGTCAAATGGAAGAGAAACGGAGAACCCTAATGTTGATAATAAACAATGTCCTGGGAAAAACCTTGTTGTGCTTTTGTGTAGATTATTTTTGGTGGAGTTTTTCTTGCGTTATGATACTTTTACTTTTGAGACTAAAGATGCTGCTATTGGTGTTTCTATTACCATTACCTCTCTCACCAAGGCTTCTACTATCTAA 1467 0.3763 MISLEQSSTTTTNNQQELPLKAIPGSYGLPFIGPIFDRHDYFYNQGRDKFFSTRIQKYNSTVFRTNMPPGPFIASNPRVIALLDAESFPILFDNKKVEKHNVFDGTFMPSTNFTGGYRILSQLDTTEPNHALIKGLLLNALLSRKDSIIPLFKRILSDSFNKIEDEISGKSGKADFNTIFSEASFNFLFNLFCDNKYPSETILGSQGPKMLDTWILFQIAPIETLKPPKIFNYLEDLLLRTVPIPACLTRSSYKKLYEAFSSSAVTILDEAEKVGLKRSEACHNLIFIAGFNGYAGLKNQFPTLFKWIALSGKELHKELANEIRTVVKQEGGVTIQSLEKMSLVKSVIYEAMRIAPVVPYQYAKAREDFIVKSHDASFEIKKGETIFGYQPFATKDPRVFDDAEVFVPKRFIGEGEKLLKYVLWSNGRETENPNVDNKQCPGKNLVVLLCRLFLVEFFLRYDTFTFETKDAAIGVSITITSLTKASTI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01339 488 CDD CYP74 53 480 - -
Trre1g01339 488 FunFam Allene oxide synthase, chloroplastic 18 487 - -
Trre1g01339 488 Gene3D Cytochrome P450 14 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01339 488 SUPERFAMILY Cytochrome P450 18 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01339 488 PANTHER CYTOCHROME P450 26 16 461 - -
Trre1g01339 488 Pfam Cytochrome P450 313 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01339 Trre-Chr1 10039435 10042627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01339 8 486 Cytochrome P450 AT5G42650 49.896 5.70e-171 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01339 K01723 - gmx:100801764 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01339 1 10039435 10042627 Trre1g01339 1 10039435 10042627 ECH