Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01338 ATGGCATCCCCATCTACCACCACCAACAGCCAGCAAGACCTCCCACTAAAACAAATCCCAGGCACCTATGGCCTCCCCTTCATCGGACCGATATTCGACCGCCACGACTACTTCTACAACCAAGGTAGAGACAAATTCTTCTCAACAAGAATCCAAAAATACAATTCAACAATCTTCAGAACAAACATGCCACCAGGCCCTTTCATTTCCTCAAACCCAAGAGTCATAGCACTCTTAGACGCCGCATCTTTCCCGATCCTCTTCGACAACAAAAAAGTCGAAAAATACAATGTCCTTGATGGTACATTCATGCCGTCGACAAATTTCACCGGCGGCCACCGTGTTTGTGCTTACTTAGACACAACTGAACCAAACCATGCACTTATCAAAGGTTTCTATCTTAATACTCTTTTGTTAAGAAAAGACACTTTTGTCCCTCTCTTTAGAACTATACTTTCTGATGCATTTAGTGTTATTGAAGATGAGCTTTCTAGTAAAAGTGGTAAAGCAGATTTTAATTCTGTTGTTAGTGATGCTTCATTTAACTTCATATTTCGTCTCTTTTGTGATAATAAAGATCCTTCTGAAACTATCCTTGGTTCTCAAGGTCCTAAGATGTTTAATATGTGGCTACTATTTCAACTTGCTCCACTTGCAACTTTAGGGCCCCCAAAATTTTTTAATTATCTTGAAGATTTCTTGCTTCGTACTATTCCCTTTCCAGCTTGTTTGGCAAGGTCTTATTACAAGAAGCTCTACGAAGTATTTTCTTCATCAGCAGTAACACTTTTAAACGAAGCTGAAAAAGCCGGTTTAAAAAGAAGTGAAGCATGCCACAATATCGTTTTCACAGCCGGCTTCAATGCATATGGAGGATTAAAGAATCAATTCCCAATTCTCTTCAAATGGGTTGGTCTAAGCGGCTCTTCGCTACACAAAGAACTCGCGAATGAAATAAGAACCATCGTTAAACAAGAAGGTGGAGTAACAATTCAGTCATTGGAAAAAATGTCGTTAGTAAAATCCGTTGTTTACGAAGCAATGCGAATAGAACCCGCCGTGCCCTATCAATATGCAAAAGCAAGAGAAGATTTGATTGTGAAGAGTCATGATGCAAGTTTTGAAATAAAAAAGGGTGAGATGATATTTGGATATCAACCTTTTGCTACTAAGGATCCTAGGGTTTTTGATGATGCCGAGGTTTTCGTTCCAAATAGGTTTATCGGAGAAGGCGAGAAGTTGTTGAAGTATGTTTTATGGTCTAATGGGAAAGAAACTGAGGAGCCTTCTATAGAGAATAAACAATGTCCCGGAAAGAATCTTGTTGTGCTTTTGTGTAGATTGTTTTTGGTGGAGTTTTTCTTGCGTTATGATACTTTTGGTTTGGAGTCTAAAAATAATGCTTTTGGTGCTGCTGTTACTATTACTTCACTCACTAAGGCTTCTACGGTTTGA 1455 0.3911 MASPSTTTNSQQDLPLKQIPGTYGLPFIGPIFDRHDYFYNQGRDKFFSTRIQKYNSTIFRTNMPPGPFISSNPRVIALLDAASFPILFDNKKVEKYNVLDGTFMPSTNFTGGHRVCAYLDTTEPNHALIKGFYLNTLLLRKDTFVPLFRTILSDAFSVIEDELSSKSGKADFNSVVSDASFNFIFRLFCDNKDPSETILGSQGPKMFNMWLLFQLAPLATLGPPKFFNYLEDFLLRTIPFPACLARSYYKKLYEVFSSSAVTLLNEAEKAGLKRSEACHNIVFTAGFNAYGGLKNQFPILFKWVGLSGSSLHKELANEIRTIVKQEGGVTIQSLEKMSLVKSVVYEAMRIEPAVPYQYAKAREDLIVKSHDASFEIKKGEMIFGYQPFATKDPRVFDDAEVFVPNRFIGEGEKLLKYVLWSNGKETEEPSIENKQCPGKNLVVLLCRLFLVEFFLRYDTFGLESKNNAFGAAVTITSLTKASTV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01338 484 Pfam Cytochrome P450 312 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01338 484 CDD CYP74 49 476 - -
Trre1g01338 484 Gene3D Cytochrome P450 10 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01338 484 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01338 484 PRINTS E-class P450 group IV signature 337 353 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01338 484 PRINTS E-class P450 group IV signature 374 388 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01338 484 PRINTS E-class P450 group IV signature 390 408 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01338 484 FunFam Allene oxide synthase, chloroplastic 14 483 - -
Trre1g01338 484 SUPERFAMILY Cytochrome P450 15 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01338 484 PANTHER CYTOCHROME P450 26 12 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01338 Trre-Chr1 10013482 10016211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01338 7 482 Cytochrome P450 AT5G42650 49.372 9.96e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01338 K01723 - gmx:100801764 752.281