Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01277 ATGTCAATCATGGAGCTTCCGGATTGTTACTATCCCATACCACCAATTAACATCACCCCATGTGCACCAACACCAAATCACACTCTCCATCTCAATAATCTTGATGATGAATTTTACAAGAAATTTATACCTTATGTGTATATATTCAAGAAATCTGTGGGAATAGATACCTTGAAGTCTTCCCTATCAAGAGTTTTGGTGGATTACTATCCTTTTGCTGGTAGGTTTAGGACAAGCACTAAGGATGAGAACAAGTTGGTGGTGGATTGTAATGGAGAAGGTGCTTTGTTTGTTGAGGCTTCAATGGATATCACAGTTGAAGAATTACTCAAATCTTCCATGATGCCAAATAGCTCATGGAAAAAGATCATTTATAATATGGAATCTAAAAATGCTGTAGATACTCCTCTTCTTATAATCCAGGTGACTAATCTTCGATGTGGAGGAATGATCTTGTGCGCATCAATCAACCATAGTTTGAGTGACGGCACCGGCGCATCACAATTTCTAAATGCTTGGGGTCAACTAACCCAAAAGCCCGATAGTAATTTGACGATTATACCCTCACATGATCGACAAGTATTGAATATTCAAGAATCCTCACAAGTAAATTTCACTCACCCAATATACATCAAAGAACCAACACACCCAAATTCCGAAACAAACCTTACGACGTGGTTTCTAACACAATCACTTGTCCCTACATCATTCATTTTTAGATTCGATGAAATTCTTCGCTTAAAGAAACAGTGTACGACATCATCGTTCAATCACATAACAAGCTTTGAAGCAATAACAGCGCACTTATGGCGCTCATTAGTAAAAGCAACTAACTTGTCCCTCTCTCGAACTGTGAAGCTTTGTTTCACCGTTAACTTTCGAAAGAAGATGAAACTTCTTCCAAAAGGGTATTATGGGAATGGATTTGTTCTCGCCGGTGTTGAGAGCATAGTGAAGGATTTAGTGGCTGCAAATAACCTAGATCATGGTGTAAAACTTGTGCAAAATGCCAAAGCTAGTGTGGATGAGGAGTATATTAAGTCAACAATTGATGTGGTGAAGGACAAAAAGGTAATTCATGATGGTTCTATAAGCTTATATGTAACGCAATGGAATAGATTAGGGTTGGAAGATGTTGATTTTGGAGAAGGAAAGCCTTTGCATTTAGGTCCTTTATCTGTTCAAATTTATTGTGTTTTTTTACCGGTTATTGGTGATCCTAATGCGGTTAGAGTGCTTTTATCAGTTCCAAAAAATATAGTGGAAAAGTTTCAACATTACATGATAGAGATAGAGTGTTGGGGAAAAGATGAATAA 1317 0.3751 MSIMELPDCYYPIPPINITPCAPTPNHTLHLNNLDDEFYKKFIPYVYIFKKSVGIDTLKSSLSRVLVDYYPFAGRFRTSTKDENKLVVDCNGEGALFVEASMDITVEELLKSSMMPNSSWKKIIYNMESKNAVDTPLLIIQVTNLRCGGMILCASINHSLSDGTGASQFLNAWGQLTQKPDSNLTIIPSHDRQVLNIQESSQVNFTHPIYIKEPTHPNSETNLTTWFLTQSLVPTSFIFRFDEILRLKKQCTTSSFNHITSFEAITAHLWRSLVKATNLSLSRTVKLCFTVNFRKKMKLLPKGYYGNGFVLAGVESIVKDLVAANNLDHGVKLVQNAKASVDEEYIKSTIDVVKDKKVIHDGSISLYVTQWNRLGLEDVDFGEGKPLHLGPLSVQIYCVFLPVIGDPNAVRVLLSVPKNIVEKFQHYMIEIECWGKDE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01277 438 Gene3D - 229 431 IPR023213 -
Trre1g01277 438 Pfam Transferase family 18 428 - -
Trre1g01277 438 Gene3D - 14 212 IPR023213 -
Trre1g01277 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01277 Trre-Chr1 9638591 9640135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01277 18 431 Monolignol Biosynthesis Gene Families AT5G48930 26.196 8.17e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01277 - - gmx:100797134 499.975