Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01276 ATGCCTCGTGGATTTCAAATTAGAGCAACTTCAGTTACTATATTTACACATTTGTTATTCATAGCAATAACCACACTTGTGTTAGTTTGGTTGTTCCATTTCCGTGAAGGTGTTGCTTTTAATTCTATCCACAAAATCAAGATTTTTAATCTTCATCCACTTCTTATGGTAATTGGGTTTATCTTAGTAGGTGGAGAAGCTATCGTGGCATTCAAGTCAATTCCTGGAAAAAGAAGCTCAGGAAAAGTGTTTCATCTTTTACTTCATCTAATAGCTCTAACATCAGGAGTTTTAGGAATTATTGTAATTTTCAAATTTAAAAAAGAGACAGGTCTTCCTAATATGTTTACATTACACTCTTGGTTAGGCATCTCAGCAATCTCTGCATTTGGTTTGCAGTATATATTGGGCTTCTTTGCTTACTTCTTCCCAGGAGCAGAAGCATCTACAAGAGCTACACTTTTGCCATGGCACAAGTTTATAGGAATAGTGATCTTCTTGCTTGCAGTTGGTACAGCTGAGACTGGTTTGATTGAATATTCTGATTTTCTACAACTGTTTAGAAACCAAGAAGCACTAATAGTGAATTTCACTGGTCTATTGCTCTTTCTATTTTCTGTCTTTGTTGGTCTCTCTGTGATTCTCCCAAGAAATTACTGA 660 0.3561 MPRGFQIRATSVTIFTHLLFIAITTLVLVWLFHFREGVAFNSIHKIKIFNLHPLLMVIGFILVGGEAIVAFKSIPGKRSSGKVFHLLLHLIALTSGVLGIIVIFKFKKETGLPNMFTLHSWLGISAISAFGLQYILGFFAYFFPGAEASTRATLLPWHKFIGIVIFLLAVGTAETGLIEYSDFLQLFRNQEALIVNFTGLLLFLFSVFVGLSVILPRNY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01276 219 SMART 561_7 51 177 IPR006593 -
Trre1g01276 219 PANTHER CYTOCHROME B561-RELATED 6 215 IPR043205 GO:0016491
Trre1g01276 219 Gene3D - 5 219 - -
Trre1g01276 219 FunFam Cytochrome b reductase 1 6 219 - -
Trre1g01276 219 ProSiteProfiles Cytochrome b561 domain profile. 15 214 IPR006593 -
Trre1g01276 219 Pfam Eukaryotic cytochrome b561 51 179 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01276 Trre-Chr1 9628445 9630584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01276 6 213 Chloroplast and Mitochondria Gene Families AT4G25570 42.925 1.90e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01276 K08360 - gmx:100785824 328.946