Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01264 ATGCAGCAAAACAAAAACAACAATCCATTCCCAATCTCACTACACAACACACACGTAAAGCTTCTAGCTTTCGATTTCCTAACCCTAACACCACCATCTTCCCCAGACAACCCTTTCACACGCAAATCAATCCCAATCACACGTGCCGAAACCCTAGGAACAATCGTCCTTCGCGATTACAAACCTGCTAAATTCCTCCGTTTCGCAATCGACGACGGAACAGGCTGCATCCCTTGTATTCTCTGGCTGAATCATATGAGTTCTCCTCATCTAGCTCGACGTCGTAGTCCACAGGATCTTTGTCTTCTTGCTGATGCTGCTTCGAGATCTGCGTCAATGGTGAAAGTTGGTGTTGTTGCTAGGGTTAGAGGGAAGGTTAGTGGATTTAAAGGTGGGGTTCAGATTACTGTTACTGATGTTTTTGTTGAAAGGGATCCTAATGCTGAGATTTTGCATTGGATTGAGTGTGTTAATTTGGCTAAGAATTGTTATAATCTTGTTAATGTTCCTTCTTCTTCTTCTGGTTCTGTAATGCGCAAATAG 543 0.4309 MQQNKNNNPFPISLHNTHVKLLAFDFLTLTPPSSPDNPFTRKSIPITRAETLGTIVLRDYKPAKFLRFAIDDGTGCIPCILWLNHMSSPHLARRRSPQDLCLLADAASRSASMVKVGVVARVRGKVSGFKGGVQITVTDVFVERDPNAEILHWIECVNLAKNCYNLVNVPSSSSGSVMRK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01264 180 SUPERFAMILY Nucleic acid-binding proteins 35 158 IPR012340 -
Trre1g01264 180 PANTHER REPLICATION PROTEIN A-RELATED 9 175 IPR040260 -
Trre1g01264 180 Gene3D - 13 167 IPR012340 -
Trre1g01264 180 Pfam OB-fold nucleic acid binding domain 56 141 IPR004365 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01264 Trre-Chr1 9570664 9571206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01264 44 159 Core DNA Replication Machinery Family AT2G24490 27.586 3.47e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01264 K23312 - csin:114287844 205.682