Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01261 ATGGTTGGTTTAGAAGTAGAGCTATCAAATGCACAAATTTATAAAAGACATGGAAATAGGTTACTCCCTTACAAGACAATAATTGTTGACCCAAAGAGGAATGGAAATTTCTCTACAATACAATCTGCCATTAATTCTATCCCTTCAAACAATAGGTATTGGACTTCCATCAATATAAAAGCAGGCATCTACAGGGAGAAGTTGAAGATTCCACATGATAAGCCATACATCATTATACAAGGAGAGGGAATGAAGAAGACTATAGTCGAATGGGATGACCATGCAAATACTGCACAAAGCCCTACGTTTTTCAGCATGGCTGACCATATTGTGGTCAAGTTTATCACTTTTAGGAATACATACAATGATCCGAAAAATGGCAATCCAATGGTACCTGCCGTAGCTGCAATGATAAGTGGTGACAAGTCATACTTCTATAGTGTTGCCTTCTTAGGTTTACAAGACACTTTGTGGGATGATGAAGGAAGACATTACTACAAGAATTGTTTAATTCAAGGTGCTGCTGATTTCATATTTGGTGCTGGCCAGTCATTATATGAGGAGTGTTCCATATATGTAATTGGTGCAGCTCTAGGACCAGGGATTTGTGGTTTTATAACAGCACAAGGGAGAACAAATCCAAATGATGCAAATGGATTTGTTTTTAAGAATTGTAATGTGTTTGGAGATGGTACAACATATTTGGGAAGACCATGGAGAGCATATGCTAGAGTTCTTTTCTACAATACCAATATGTCCAAAATTGTACTACCTCTTGGTTGGGATCCATGGCATTTAGTTGGTCACGAGGATCACATACAATTTTCAGAGTATAAAAATTATGGACCTGGTTCTAACACAAACAATCGAGTGAAATGGATGAAGAAATTGGACTTGCGAACAGTTACTAGAATGGCAAGTATTGGTTTTATTGATGATGAAGGATGGGTTAAAAATCAACTATTTTAA 969 0.3695 MVGLEVELSNAQIYKRHGNRLLPYKTIIVDPKRNGNFSTIQSAINSIPSNNRYWTSINIKAGIYREKLKIPHDKPYIIIQGEGMKKTIVEWDDHANTAQSPTFFSMADHIVVKFITFRNTYNDPKNGNPMVPAVAAMISGDKSYFYSVAFLGLQDTLWDDEGRHYYKNCLIQGAADFIFGAGQSLYEECSIYVIGAALGPGICGFITAQGRTNPNDANGFVFKNCNVFGDGTTYLGRPWRAYARVLFYNTNMSKIVLPLGWDPWHLVGHEDHIQFSEYKNYGPGSNTNNRVKWMKKLDLRTVTRMASIGFIDDEGWVKNQLF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01261 322 SUPERFAMILY Pectin lyase-like 23 318 IPR011050 -
Trre1g01261 322 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 318 - -
Trre1g01261 322 FunFam Pectinesterase 23 321 - -
Trre1g01261 322 Gene3D - 23 322 IPR012334 -
Trre1g01261 322 Pfam Pectinesterase 27 306 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01261 Trre-Chr1 9546243 9548783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01261 25 270 Carbohydrate Esterase AT2G19150 49.393 7.98e-81 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01261 - - aprc:113870328 450.669