Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01252 ATGGAGATACACATAGAATATTGGGTTTGGACATTTGCTACTTTGTTAGCATGCTATTTTTGTGTGAACAATTTTGTATGGAGATTGAATGAGTGGTATTACAATATGAAACTAAGAAAGAAACAATACCCTCTTCCTCCTGGTCATTTGGGATGGCCTTTTATAGGCAATATGTTGGCCTTTGTTAAAGATTTCAAATATGGTCATCCTAATTCATTCATCAACAACCTTATTTCCAGATATGGACGAACTGGAATCTACAAGTCTCACTTGTTTGGAAGTCCAAGCATCATCATTTGTGATGCCGATATGTGTAGGCGAGTGTTAATGGATGATGAGACTTTTAAAATCGGTTATCCAAAATCAACTATAGAAATGACTAGATGTAAATCCCTTTGGAGTTCATCTAGAGAAGAGCTAAAGCGTTTTAAACAATTAAACGTCTAA 447 0.3512 MEIHIEYWVWTFATLLACYFCVNNFVWRLNEWYYNMKLRKKQYPLPPGHLGWPFIGNMLAFVKDFKYGHPNSFINNLISRYGRTGIYKSHLFGSPSIIICDADMCRRVLMDDETFKIGYPKSTIEMTRCKSLWSSSREELKRFKQLNV 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01252 148 Gene3D Cytochrome P450 35 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01252 148 PANTHER CYTOCHROME P450 26 40 144 - -
Trre1g01252 148 SUPERFAMILY Cytochrome P450 39 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01252 Trre-Chr1 9486681 9487811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01252 9 148 Cytochrome P450 AT1G05160 50.000 1.23e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01252 K04123 - ag:BAG68929 186.422