Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01251 ATGTACCTAACTCGCATGGAGGACATCGTGATTAATTCTTTGGAGGAACTTTCTAGTATGAGTCACCCAGTTGATTTTTTGAAAGAGATGAAAAATATTTCCTTTAATATCATTATTGAAATTTTTATGGGCTCTTACAATCAACATATCATTACCAAAATAGGGAATTCTTTTACTGAAATTTATAGTGCTTTGTTCTCTATGCCCATTAACTTTCCTGGTTTTGCTTTCCATAAAGGACTCCTGGCACGTGAGAAGTTGGCCAAATTAATTCAACCAATTGTAGAAGAAAGGAGGTTGATGAGAAAAAATGGTGACAAAAAAGATTTACTGGATATTCTTTTGGAGTTGAGAGATGAAGATGGTTGGAAACCGCAGGATGAGGACATTGTTGACATGATGATAGGGTATGTACTTGCTGGTCATGAAGCCACAGCAAATGGTATGATGTGGTCAATTATATATCTTACACAAAATCCACATATCTTGAAAAAAGCAAAGGAGGAGCAGGAGGAAATTATGAAGACAAGATTGCCCACACAAAAACAATTAAGTATTAAGGAGATTAAACAAATGCTGTATCTTTCTCATATAATCAATGAAATGTTACGACTTATCTCTTTCAACTTTGCATTTTTTCGGGAGGCAACTAAAGATGTGAATATGAATGGTTATATAATACCAAAAGGATGGAAAGTTCTCACTTGGGCAAGAGCTATTCATATGGATCCTGCATATTATTCAAATCCGGATGAATTTAATCCATCTAGATGGAATGATCACAATGCCAAAGTTGGGACTTTCCTTCCTTTTGGAGCTGGAAGTATGCACTGTCCTGGGAGTGACCTGGCAAAAATTGAAATTTCCATATTTCTACATCATTTTCTTCTGAATTACAAGCTGGAGCGAGTAAATCCAAAATGTCCTATTACTTGCTTACCATCATCCAAACCCAAAGACAATTGCCTTGCTAAGGTGATAAAGGTCTCAAGTGTTGGTGCATAG 1005 0.3602 MYLTRMEDIVINSLEELSSMSHPVDFLKEMKNISFNIIIEIFMGSYNQHIITKIGNSFTEIYSALFSMPINFPGFAFHKGLLAREKLAKLIQPIVEERRLMRKNGDKKDLLDILLELRDEDGWKPQDEDIVDMMIGYVLAGHEATANGMMWSIIYLTQNPHILKKAKEEQEEIMKTRLPTQKQLSIKEIKQMLYLSHIINEMLRLISFNFAFFREATKDVNMNGYIIPKGWKVLTWARAIHMDPAYYSNPDEFNPSRWNDHNAKVGTFLPFGAGSMHCPGSDLAKIEISIFLHHFLLNYKLERVNPKCPITCLPSSKPKDNCLAKVIKVSSVGA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01251 334 PANTHER CYTOCHROME P450 26 1 314 - -
Trre1g01251 334 Pfam Cytochrome P450 6 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 SUPERFAMILY Cytochrome P450 6 323 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 Gene3D Cytochrome P450 1 329 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 PRINTS P450 superfamily signature 140 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 PRINTS P450 superfamily signature 197 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 PRINTS P450 superfamily signature 269 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 PRINTS P450 superfamily signature 278 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 PRINTS E-class P450 group I signature 236 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 PRINTS E-class P450 group I signature 129 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 PRINTS E-class P450 group I signature 149 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 PRINTS E-class P450 group I signature 268 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01251 334 PRINTS E-class P450 group I signature 278 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01251 Trre-Chr1 9482001 9486645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01251 1 329 Cytochrome P450 AT2G32440 48.193 7.63e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01251 K04123 - ag:BAG68929 478.018