Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01248 ATGGGGAAGTATAATTTACCAAATGAAAGGAAAAATGATTGGCTTGAAGCACTTTTGATAGATAACTTTGGTAATTGCAAGAACCATCAAGAAAAGTTTAATGAGAAGAATGTGTTTTGTGTAGATTGTGGAATGAGTTTGTGTAGACATGGTAAAGAATCTCATTCTCTTCATCAAAGGTTTCAAATTTACAAATATTCTTATCAAGATGTTGTCAAATATTCTGACCTGCTCAAGTATTTTGATTGCTCAAATATCCAGACATATATATCAAACAATGACAAGATTGTGCATCTCAAACCTCGACCTATATCCAAAGAAAAGAAACTAGCAATAAAACCTAAATTTGCTAGTTTAAACCATGAGAATCAAATCAAGGAAACAAAAACATCAACATCTAATAATAAGCTAGGTGGAATTTGTGAGCAATGTGGGAAACATTTACAAGACAAGCGTAACCGATTTTGTTCCGTTAGATGCAAGATGTCAATTGAGGAGCTTGGAGTAAACCAAAATGATCATAACCAAAATTCAGAGGCTGAGTCATCTATCTCTATGGCTGAACCATATGAATATGTTGAAAGAATGAATTTCAGAAAGCGTCCAAGGAAAAACACACCTATGAGATCTATCTCTAGCTTTGTATATTGCAATTGA 657 0.3318 MGKYNLPNERKNDWLEALLIDNFGNCKNHQEKFNEKNVFCVDCGMSLCRHGKESHSLHQRFQIYKYSYQDVVKYSDLLKYFDCSNIQTYISNNDKIVHLKPRPISKEKKLAIKPKFASLNHENQIKETKTSTSNNKLGGICEQCGKHLQDKRNRFCSVRCKMSIEELGVNQNDHNQNSEAESSISMAEPYEYVERMNFRKRPRKNTPMRSISSFVYCN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01248 218 Pfam PLATZ transcription factor 65 162 IPR006734 -
Trre1g01248 218 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01248 Trre-Chr1 9470742 9472026 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre1g01248 PLATZ 5.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01248 - - mtr:25482577 285.034