Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01234 ATGGTAGTTGAGATATTTATTTTCATTGTAAATGCTGCAGATCCTGATAGACCACGGAACGACAAGGCAACCATCATGACGGAGACAATCCAAGTGCTAAAGGACATAACAGATGAAGTTGATAGACTGAAAACAGAACAAAAATCAAATTATGAAGAGGCACACGAACTAATACAAGAAAATAATGAACTCCGAGAAGAGACAGCGTCTTTAAAATCCGATGTAGAAAATATTAATTCCCAGTATCAGCGGATGGTCAGAGTCATGCCACCATGGACTGCAATTGACCATTCTGTTATGATGAGTAGCCCTTATCCATATCCAGTTCCTATACCAATCCCGCCAGCACCAGTTTCCATTCACCCGCCACCTTTGCAACCTTTTCCTTACTTTGTAAACCAAAATCCTGGTCATATTCCAAGTCTATGCTCAATGTATATTCCATTCTCGGCGCCAGCTAATCCCCCAGTTGAGATGCCATCAGCTCAGTATGCTTCTACGTTCCACATGTTTAGTCGAAAAGAGTCTCAAAGCAAGTCACCCGGTGATAAAAGAAGACCTAGTGATACAGACAAATGTAGTGTGTCTCCTGATGTTGCAACAGAACTTGAACTAAAGATGCCTGGATCATCAACACAACAGGATTGCACATCTAGAGGAAAAAAGGGCAAGCATTCGGTGATGAGTGATAGAATCATCATCGATGAGAGTGCCTCGAGTCAGGATTCACCATATCAGGGACATCAAGATAGCTCCAACAGCATTGGCGACACTCCAAAGGCCGTTGATTCTTGTACCATTTGA 804 0.4241 MVVEIFIFIVNAADPDRPRNDKATIMTETIQVLKDITDEVDRLKTEQKSNYEEAHELIQENNELREETASLKSDVENINSQYQRMVRVMPPWTAIDHSVMMSSPYPYPVPIPIPPAPVSIHPPPLQPFPYFVNQNPGHIPSLCSMYIPFSAPANPPVEMPSAQYASTFHMFSRKESQSKSPGDKRRPSDTDKCSVSPDVATELELKMPGSSTQQDCTSRGKKGKHSVMSDRIIIDESASSQDSPYQGHQDSSNSIGDTPKAVDSCTI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01234 267 PANTHER TRANSCRIPTION FACTOR BHLH121 4 260 IPR044579 GO:0003700|GO:0006879
Trre1g01234 267 MobiDBLite consensus disorder prediction 233 267 - -
Trre1g01234 267 MobiDBLite consensus disorder prediction 176 192 - -
Trre1g01234 267 MobiDBLite consensus disorder prediction 172 267 - -
Trre1g01234 267 Coils Coil 26 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01234 Trre-Chr1 9381931 9383050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01234 4 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 45.133 1.61e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01234 - - cam:101509613 352.829