Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01133 ATGTATGTTCTTACCATGGATGCTCTTAATAAGGGCATGAGTCATTATATTTTTGTGGTATATCGTAATGTCATCGCCACTATAGCTCTTGCTCCCTTCGCATTTTTTCTTGAAAGGAAAATTAGGCCCAAGATGACAGTTCGGATATTCTCAGAAATTTTTGCACTAGCTTTTGTTGAGATAATACTTGATCAGTGTTTCACGTTCTTGGGGATGAAGCTAACATCAGCATCATTTGCATCTGCCGTGATGAATTCCGTACCATCTATTACCTTTGTACTTGCAATCATTTTTAGATTGGAGCGCATGAAAATTAAGGAGATAGGATGTCAAGCTAAAGTGATTGGCACAGTTGTGAGTTTGGGAGGTGCATTTCTAATGGCACTATACAAAGGTCCAATTCTACAAATTGCTGGGTCATCGGCAGCTACTCAAGTGCACCAGCCTGAAAATGTGAATGACCCTAGTGGTTCACATTGGCTCCTTGGTGCATTGTTTCTTCTCATTGGTTGCGCCGGCTTCTCTGCTTTCTACATTTTACAAGCCATAACATTAAAAAAGTATCCAGCAGAGATGTCACTAGCCACGTGGGTTTGTTTTATTGGTGCACTTCAAAGTAGTGCTGTGACAATTTTCATGGAGCGCAAAAGCCCGGATGCCTGGGCTTTGGGCTTGGATTCAAGACTCTTTGCTTCACTATATGCGGGAATAGTAACTTCAGCAATTCAATTTTATGTGCAAGGCTCTGTAATTAAAACTATGGGCCCTGTTTTTGTGGCTGCTTTTAATCCCCTACGTATGATTATAGTCACAGCCTTGGCTTGTATCTTCCTCTCGGAGAAACTCCACCTCGGAAGTATTGTTGGAGGAGTGGTAGTGGTTACAGGGTTATATCTTGTTGTATGGGGAAAATCCAAAGAACAAAAAAGAATAATGTTAGAAGAAGAGGCTCCACAAAAAATCTCCCAACAAGGACAACAACAACTACCAATAACTGTCCCCAAAATTGATGTCAATGATAATAATAAACATCAATTGGTCATAATTGGAGACCAAACAAGCACATAG 1068 0.4045 MYVLTMDALNKGMSHYIFVVYRNVIATIALAPFAFFLERKIRPKMTVRIFSEIFALAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMKIKEIGCQAKVIGTVVSLGGAFLMALYKGPILQIAGSSAATQVHQPENVNDPSGSHWLLGALFLLIGCAGFSAFYILQAITLKKYPAEMSLATWVCFIGALQSSAVTIFMERKSPDAWALGLDSRLFASLYAGIVTSAIQFYVQGSVIKTMGPVFVAAFNPLRMIIVTALACIFLSEKLHLGSIVGGVVVVTGLYLVVWGKSKEQKRIMLEEEAPQKISQQGQQQLPITVPKIDVNDNNKHQLVIIGDQTST 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01133 355 Pfam EamA-like transporter family 162 301 IPR000620 GO:0016020
Trre1g01133 355 Pfam EamA-like transporter family 3 128 IPR000620 GO:0016020
Trre1g01133 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 131 - -
Trre1g01133 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 306 - -
Trre1g01133 355 PANTHER WAT1-RELATED PROTEIN 1 315 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01133 Trre-Chr1 8540213 8543691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01133 1 352 Nodulin-like Gene Family AT2G37460 43.716 8.15e-109 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01133 - - gmx:100813852 558.91