Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01132 ATGGGTGAATTAACATATTGTGAGAAAACTAATGCATGGTTAAGAAATTCAAAGTCATATTTGCTAATAATTAGTTTGCAATTTGGCTCAGCTGGCATGTATGTTCTTACCATGGATGCTCTTAATAAGGGCATGAGTCATTATATTTTTGTGGTATATCGTAATGTCATCGCCACTATAGCTCTTGCTCCCTTCGCATTTTTTCTTGAAAGGAAAATTAGGCCCAAGATGACAGTTCGGATATTCTCAGAAATTTTTGCACTAGCTTTTGTTGAGATAATACTTGATCAGTGTTTCACGTTCTTGGGGATGAAGCTAACATCAGCATCATTTGCATCTGCCGTGATGAATTCCGTACCATCTATTACCTTTGTACTTGCAATCATTTTTAGATTGGAGCGCATGAAAATTAAGGAGATAGGATGTCAAGCTAAAGTGATTGGCACAGTTGTGAGTTTGGGAGGTGCATTTCTAATGGCACTATACAAAGGTCCAATTCTACAAATTGCTGGGTCATCGGCAGCTACTCAAGTGCACCAGCCTGAAAATGTGAATGACCCTAGTGGTTCACATTGGCTCCTTGGTGCATTGTTTCTTCTCATTGGTTGCGCCGGCTTCTCTGCTTTCTACATTTTACAAGCCATAACATTAAAAAAGTATCCAGCAGAGATGTCACTAGCCACGTGGGTTTGTTTTATTGGTGCACTTCAAAGTAGTGCTGTGACAATTTTCATGGAGCGCAAAAGCCCGGATGCCTGGGCTTTGGGCTTGGATTCAAGACTCTTTGCTTCACTATATGCGGGAATAGTAACTTCAGCAATTCAATTTTATGTGCAAGGCTCTGTAATTAAAACTATGGGCCCTGTTTTTGTGGCTGCTTTTAATCCCCTACGTATGATTATAGTCACAGCCTTGGCTTGTATCTTCCTCTCGGAGAAACTCCACCTCGGAAGTATTGTTGGAGGAGTGGTAGTGGTTACAGGGTTATATCTTGTTGTATGGGGAAAATCCAAAGAACAAAAAAGAATAATGTTAGAAGAAGAGGCTCCACAAAAAATCTCCCAACAAGGACAACAACAACTACCAATAACTGTCCCCAAAATTGATGTCAATGATAATAATAAACATCAATTGGTCATAATTGGAGACCAAACAAGCACATAG 1164 0.3978 MGELTYCEKTNAWLRNSKSYLLIISLQFGSAGMYVLTMDALNKGMSHYIFVVYRNVIATIALAPFAFFLERKIRPKMTVRIFSEIFALAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMKIKEIGCQAKVIGTVVSLGGAFLMALYKGPILQIAGSSAATQVHQPENVNDPSGSHWLLGALFLLIGCAGFSAFYILQAITLKKYPAEMSLATWVCFIGALQSSAVTIFMERKSPDAWALGLDSRLFASLYAGIVTSAIQFYVQGSVIKTMGPVFVAAFNPLRMIIVTALACIFLSEKLHLGSIVGGVVVVTGLYLVVWGKSKEQKRIMLEEEAPQKISQQGQQQLPITVPKIDVNDNNKHQLVIIGDQTST 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01132 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Trre1g01132 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 338 - -
Trre1g01132 387 Pfam EamA-like transporter family 19 160 IPR000620 GO:0016020
Trre1g01132 387 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020
Trre1g01132 387 PANTHER WAT1-RELATED PROTEIN 21 347 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01132 Trre-Chr1 8540213 8543787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01132 9 384 Nodulin-like Gene Family AT2G37460 42.564 6.13e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01132 - - gmx:100813852 596.66