Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01131 ATGGTTTCATTCAAGCATGGCATGAGTCATTGGGTACTCTCTGTGTACCGTCATGTTGTCGCTACTATCTTCATGGCTCCTTTTGCCCTCGTCCTCGAAAGAAAAATTAGGCCAAAGATGACACTCCCCATTTTCTTGAGGTTGGCGGTCCTTGGTTTCCTTGAGCCAGTGCTTGATCAAAATTTGTACAACTTGGGAATGAAGAACACATCAACAACATTTGCATCTGCTACCGTTAACATTCTTCCAGCTATTACTTTTATAATGGCAATCATTTTCAGGTTAGAGACCGTTAACTTCAGAAAAATTCACAGCATAGCAAAAGTAGTTGGAACAGTTGTAACTGTATCGGGAGCAATGGTTATGACATTATACAAAGGCCCTGCCTTTCAACTCATTAAGGGACAATCAACAAATCAGCATGAAAGTGGAAGCACTGAACCCTCTGAACAAAATTTTGTGGCTGGGACTATAATGCTCATTTGCAGTTGTGGTGGTTGGGCTAGTTTCTTTATCTTGCAATCTTTCACTTTGAAGATGTACCCAGCAGAACTCTCTATGACTGCTTGGATTTGCTTTTTGGGTATCTTTGAAGGTGCAATTGCAACCTTCATATTTGAACGTGACATGAGTGTTTGGTCTTTAGGCTTTGACTCTAGACTTCTTGCTTGTGTTTACTCTGGTATTGTGTGTTCTGGAATGGCATACTATGTACAAGGAGTTGTGACAAGAGAACGTGGGCCTGTGTTTGTTACTTCCTTCAGCCCTTTATGTATGATCATCACAGCTGCATTGGGTTCTATTGTCTTAGCTGAGCAAACTCATTTGGGAAGTATTATTGGAGCTATTATCATTGTGTGTGGACTATACACTGTGGTGTGGGGGAAAAGCAAAGACAGTGTGAACAATACAACACAAAATGAGGGACAAGAATTGCCAATAAAGGATGCTACAAAAACAGGGTCAGACATTTTTGAAAGTGTTGAGGTCAATGTTCCTAATGATATTAAGCTTGGAGGAAAGAATGTCAAAACATAA 1038 0.4037 MVSFKHGMSHWVLSVYRHVVATIFMAPFALVLERKIRPKMTLPIFLRLAVLGFLEPVLDQNLYNLGMKNTSTTFASATVNILPAITFIMAIIFRLETVNFRKIHSIAKVVGTVVTVSGAMVMTLYKGPAFQLIKGQSTNQHESGSTEPSEQNFVAGTIMLICSCGGWASFFILQSFTLKMYPAELSMTAWICFLGIFEGAIATFIFERDMSVWSLGFDSRLLACVYSGIVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQTHLGSIIGAIIIVCGLYTVVWGKSKDSVNNTTQNEGQELPIKDATKTGSDIFESVEVNVPNDIKLGGKNVKT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01131 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 16 117 - -
Trre1g01131 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 210 297 - -
Trre1g01131 345 PANTHER WAT1-RELATED PROTEIN 3 305 IPR030184 GO:0016020|GO:0022857
Trre1g01131 345 Pfam EamA-like transporter family 7 116 IPR000620 GO:0016020
Trre1g01131 345 Pfam EamA-like transporter family 156 293 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01131 Trre-Chr1 8513618 8519515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01131 1 338 Nodulin-like Gene Family AT4G08300 63.081 3.96e-153 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01131 - - tpra:123903307 672.93