Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01099 ATGGCGTCATCTAAAGTCAACAAGAAAGTCTTTGATTCAGAAGAAGCTTTAGCGACGGTTAAGGATCTAAGAACAACGTTTGACTCTGGTAAGACACGAAGCTACGAATGGAGAGTTTCTCAATTGAAAGCACTTTTGGAGTTAACGGAACAAAAGGAGCAAGAGATTGTTAAAGCTCTCTACTCTGACTTATCTAAATCTGAAGCTGAATCATACATCCAAGAGATTTCTATGTTGAAAAACTCATGTAAAAATGCAATCAAGGAATTGAAGCATTGGATGGCTCCAGAAAAGGTCAAAACATCACTCACAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTTGGAGTTGTTTTGGTTATCTCTGCATGGAACTATCCATTTTTGCTATCACTTGATCCAGTCATTGGAGCTATTGCAGCCGGTAATGTTGTGGTCTTAAAACCATCGGAAATTGCTCCAGCCACATCATCATTGCTCGCAAAACTATTGGGGGAATACATGGATAACTCATCTATAAGAGTTGTTGAGGGAGCAGTTGATGAAACATCTGCATTACTGCAACAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAAAGTGGCACGCATAGTGATGGCTGCTGCTGCTAAGAACCTTACACCAGTTGTGTTGGAGCTTGGAGGAAAATCACCGGTTATTGTTGATTCAGATATCAACTTACAGGTGGCAACTAGAAGAATAATTGCTGGAAAATGGGGTTGCAATAATGGGCAAGCTTGCATTTCTCCGGATTATATTATAACTACAAAAGACTATGCCCCTAAGTTGGTGGATGCTCTGAGGACTGAATTGGAGAGTTTTTATGGAACGAATCCATTGGAATCAAAAGATTTGTCTCGTATTGTAAACTCAAACCATTTTGCTCGCTTGTTAAAGCTTTTGCAAGATGATAAAGTTTCTGGTAAAATTGTTTATGGAGCTAAAGTGAATGAAAGCAAATTGCGGATTAGCCCTACTATTCTATTGGATGTTCCGCGAGATTCTCTGATAATGAGTGAGGAGATATTCGGTCCATTACTTCCCATCATCACGGTTGATAATCTAGAAGAAAGCTTTGATGTGATAAATTCAGGATCAAAACCTCTTGCTGCATATTTATTTACAAACAATAAGAAACTCAAGGAGCGGTTTGTTAAATCTGTTTCTGCTGGTGGTTTGGTCATCAATGACACTACTTTGCATCTTGCAGTTAAAACTTTGCCTTTTGGTGGAGTAGGAGACAGTGGACTTGGTGCATACCATGGAAAATTCTCATTTGATGCATTTAGCCATAAAAAAGCAGTTTTATATCGCAGTTTTTTTGGTGATGCTTCTATAAGGTATCCACCATATACCAAGACAAAGATGAGATTGTTGAAGGCTCTCATGACCGGTGGCTTACTAGCTATAATTAATGCCATATTTGGAAGGTCTTAG 1467 0.3872 MASSKVNKKVFDSEEALATVKDLRTTFDSGKTRSYEWRVSQLKALLELTEQKEQEIVKALYSDLSKSEAESYIQEISMLKNSCKNAIKELKHWMAPEKVKTSLTTFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNVVVLKPSEIAPATSSLLAKLLGEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGKVARIVMAAAAKNLTPVVLELGGKSPVIVDSDINLQVATRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALRTELESFYGTNPLESKDLSRIVNSNHFARLLKLLQDDKVSGKIVYGAKVNESKLRISPTILLDVPRDSLIMSEEIFGPLLPIITVDNLEESFDVINSGSKPLAAYLFTNNKKLKERFVKSVSAGGLVINDTTLHLAVKTLPFGGVGDSGLGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTKTKMRLLKALMTGGLLAIINAIFGRS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01099 488 Coils Coil 69 89 - -
Trre1g01099 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Trre1g01099 488 PIRSF ALDH 4 482 IPR012394 GO:0006081
Trre1g01099 488 FunFam Aldehyde dehydrogenase 225 425 - -
Trre1g01099 488 Pfam Aldehyde dehydrogenase family 12 445 IPR015590 GO:0016491
Trre1g01099 488 SUPERFAMILY ALDH-like 18 460 IPR016161 GO:0016491
Trre1g01099 488 CDD ALDH_F3FHI 19 447 - -
Trre1g01099 488 FunFam Aldehyde dehydrogenase 24 228 - -
Trre1g01099 488 PANTHER ALDEHYDE DEHYDROGENASE 16 475 IPR012394 GO:0006081
Trre1g01099 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Trre1g01099 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 443 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01099 Trre-Chr1 8319510 8327102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01099 11 488 Aldehyde Dehydrogenase Gene Family AT4G34240 68.619 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01099 K00128 - gmx:100778722 763.837