Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01069 ATGGTTTTTTACATGATGGTTGATAGCTTTCATCACTTCTTCATTTCTGGTTGCAGAAGCAGCAGCAGCAAAGGTATCCTAGAAGGTTCAACTAAACTTAATCGACTGAAATTTTATGGAACCGATGTTACACCTGGCTTGTCCTCTCATAATTTTGCTCCTGATAAGCACAGAAGCATGTACATGAATGATTCTTACTCGATTGAGAGTTATGAAAAATACTTCCTTGATTCACCGACAGAAGAACTGATAGAACCATCTAGTTCTGGCATATCAGGAAATTCAGTTCATGCTGATAGTGATTCTTCTTACCAACTCAGAGCTAATTCTGGAGGTTCTATGGTCACTGATAACCCATTCGATACTTATGTATCGTCTACAAGGAAACGTGATGCCTATCAGTCAAACTTTGAATCAGATTTGTTTGATAATGAGAGCCCAGATTGCTTTGAATTTGACGGTGAAATGCGATTGAAACTACAGGAATTGGAGAGGGCATTGCTTGGTGACAATAATGATGATTGCGATGACGATGGGGAAAACATATTTAGGACTGTACAGAGCATGGATATTGATCCTGACTTTGCTGAGTGCGCCAATCCTGCTAAGAACATGTCACTTCACGACTCACCAAAGGAATCTTTGTCATCAGATTCCAATCTTAGTTGCAGCAGCAGCTGCAAAGAAATATCGCAAAAATCTCCTCGGACCCCGAAGCAGTTACTCTATGAATGTGCTAGTGCACTTTCAGAAGGAAATGAAGTAAAAGCCTCAGCTATGATAGACGATCTCAGGCAGATGGTTTCGATTCAGGGAGATCCTTCCACAAGAATTGCAGCCTACATGGTGGAAGGACTTGCAGCTCGTTTGGCTTCGTCCGGAAAATCTATTTATAAAGCTTTGAGATGCAAGGAACCTCCTTCTTCCGATCGTCTAGCAGCAATGCAGATACTATTCGAGGTGTGCCCGTGTTTTAAATTTGGATTCATTGCTGCAAATGGTGCTATTGCTGAGGCTATTAAAGATGATAAGAAGGTTCACATAATAGATTTTGATATCAACCAAGGAAGTCAATATATAACCCTAATACAAACACTTGCTTCTAGGCCGGGGAAACCGCCTTTTGTGAGATTGACCGGCGTTGATGATCCTGAATCAGTTCAGCGATCTGTTGGAGGCCTAAGTATTATAGGACAGAGACTTGAAAAGCTAGCAGAAGTACTTGGATTGCCGTTTGAATTTCGTGCCGTAGCGTCAAGTTCTTCAGTTGTTACTCCATCAATGCTCAACTGTCGTCCCGGGGAAGCAATTGTGGTGAACTTTGCATTCCAACTTCATCACATGCGCGACGAAAGTGTATCAACAGTAAATGAGCGAGACCAGCTTCTTCGAATGGTTAAGAGCCTTAATCCAAAACTTGTAACAGTTGTGGAACAAGACGTAAACACCAACACTTCTCCGTTTCTCCCACGATTTGTTGAAGCCTACAATTACTACTCTGCCGTATTCGAGTCGCTCGACGCCACTCTTCCAAGAGAGAGTCAAGATAGGGTGAATGTTGAAAGGCAATGCTTGGCAAGGGACATTGTCAATATCATTGCGTGCGAGGGCGAGGATAGAATAGAAAGGTATGAAGTCGCTGGAAAATGGAGGGCGAGGATGAAAATGGCTGGATTTACTTCATCACCAATGAGTACAAATGTCGAAGAAGCAATTAAGGAACTCATTAGGCAGTATTGTGACAAGTACAAGATAAATAGAGAAATGGGGGCACTTCATTTTGGATGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTGA 1827 0.4209 MVFYMMVDSFHHFFISGCRSSSSKGILEGSTKLNRLKFYGTDVTPGLSSHNFAPDKHRSMYMNDSYSIESYEKYFLDSPTEELIEPSSSGISGNSVHADSDSSYQLRANSGGSMVTDNPFDTYVSSTRKRDAYQSNFESDLFDNESPDCFEFDGEMRLKLQELERALLGDNNDDCDDDGENIFRTVQSMDIDPDFAECANPAKNMSLHDSPKESLSSDSNLSCSSSCKEISQKSPRTPKQLLYECASALSEGNEVKASAMIDDLRQMVSIQGDPSTRIAAYMVEGLAARLASSGKSIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAIAEAIKDDKKVHIIDFDINQGSQYITLIQTLASRPGKPPFVRLTGVDDPESVQRSVGGLSIIGQRLEKLAEVLGLPFEFRAVASSSSVVTPSMLNCRPGEAIVVNFAFQLHHMRDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVFESLDATLPRESQDRVNVERQCLARDIVNIIACEGEDRIERYEVAGKWRARMKMAGFTSSPMSTNVEEAIKELIRQYCDKYKINREMGALHFGWEDKNLIVASAWK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01069 608 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 217 603 IPR005202 -
Trre1g01069 608 Pfam GRAS domain family 239 608 IPR005202 -
Trre1g01069 608 ProSiteProfiles GRAS family profile. 229 608 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01069 Trre-Chr1 8058428 8064756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01069 48 608 GRAS Transcription Factor Family AT1G21450 62.191 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre1g01069 GRAS 1.8e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01069 - - gmx:100807048 869.766