Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01065 ATGCCATCATGGGTTTGTATCAAGAGTAAACCTCTTATTCTGAAAGTGGTTATGCTTTATATGCCAGGCCTGGATGCAGCTTTGTACCTGTCACTGTCCAAAGCGCTTCCTAATTTTAAAAAATCATGTGGCAAACCAAGACCAGTCCTTGCTCTCAGCGTGTCAGATAGTATGCAGACATTAGACGCACTCCTAACATGCAAGCCGAAAAGAAAAATGGATCAAAACATTTCAATTATGACAAAATTGTCTCCGACATCTCAACAAGAAGTCTGCGGTGGTACTGCCGGTCTATCATTTGAGGAGATTACGAAAGACATACCTTTCCCTGTTGCATACTATACACTAACAGAGAAAGATCTGGAAGAGAATGAATATCCTGTTAATAAGCCAGGTTTTCTTTCTACTCTTCCTGCTCCTTTGGGATCTCCTTTTTATGAGATGGTAGCACTTGACTGTGAGATGTGCATAACAGGTGAGGGGTTTGAGCTTACAAGAGTTACTCTAGTGGATGTCAAAGGACAGGTTTTGTTAGATGAATTGGTAAAACCTTCAAATCATATCATTGATTACAATACAAGATTTAGTGGAATAACGGCCGAGATGTTAGATGGGGTGGCGACAAGTTTGGCAGACATTCAGGAAGAGTTCCGAAAACTGGTTTACAAAGAAACTATTCTTGTTGGGCATTCTTTGGAAAATGATTTATTAGCATTGAAGATATCACATGACTTGGTGATTGACACAGCAGTATTATACAAACACCCCCGAGGGTCTCCCTATAAATCCGCTCTACGGTTTCTTACTAAAAGATTTCTTTCAAGGGAGATACAGCAATCATGGAATGGACACGATAGTATTGAAGATGCTAGAGCTACCATGGAATTAGCACTATTGAAGATCAGAAATGGCAAGTAA 918 0.3998 MPSWVCIKSKPLILKVVMLYMPGLDAALYLSLSKALPNFKKSCGKPRPVLALSVSDSMQTLDALLTCKPKRKMDQNISIMTKLSPTSQQEVCGGTAGLSFEEITKDIPFPVAYYTLTEKDLEENEYPVNKPGFLSTLPAPLGSPFYEMVALDCEMCITGEGFELTRVTLVDVKGQVLLDELVKPSNHIIDYNTRFSGITAEMLDGVATSLADIQEEFRKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSPYKSALRFLTKRFLSREIQQSWNGHDSIEDARATMELALLKIRNGK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01065 305 FunFam RNA exonuclease NEF-sp 145 305 - -
Trre1g01065 305 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 304 IPR047021 GO:0004527
Trre1g01065 305 Gene3D - 146 305 IPR036397 GO:0003676
Trre1g01065 305 Pfam Exonuclease 149 296 IPR013520 -
Trre1g01065 305 CDD REX1_like 149 298 IPR034922 -
Trre1g01065 305 SMART exoiiiendus 147 305 IPR013520 -
Trre1g01065 305 SUPERFAMILY Ribonuclease H-like 148 300 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01065 Trre-Chr1 8043160 8046541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01065 147 296 C2H2 Transcription Factor Family AT5G40310 31.138 2.11e-08 53.1