Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01041 ATGGCATTAGAAGTCCTTGAGGCTCTTGATTCAGCTCGAACACAATGGTACCATATAACAGCCATAGTAATTGCAGGTATGGGATTCTTCACTGATGCTTATGATCTCTTTTGCATAACAACCGTTTCAAAGCTATTAGGACGGTTATATTACTTCGATCCAAGCAGTGGCAAACCGGGGAAGCTCCCACCAATAGTTAACAACTTTGTCACTGGTGTGGCCTTGGTCGGAACACTTTGCGGCCAATTGTTTTTTGGCTACCTTGGAGACAAACTAGGGCGCAAAAAAGTCTATGGCATCACACTCATTCTCATGGTCGCTTGTGCCATTTGCTCCGGCCTTTCCTTTGGTTCATCACCGAAATCCGTTATGACAACCCTTTGTTTTTTCAGGTTCTTTCTTGGATTTGGTATTGGTGGAGACTACCCTTTGTCTGCAACTATCATGTCAGAATATGCCAACAAAAGGACACGTGGCGCATTCATAGCAGCTGTTTTCGCGATGCAAGGCGTGGGAATTATCTTTGCTGGGTTGGTTTCAATGGTCTTATCAGCTGTTTTCAAAGCATATTACGATGCTCCAACTTTCTCTAAAGACCCAATTTTGTCAACACAGCCCGAAGGTGATTTATTGTGGCGATTAGTTCTCATGATTGGTGCTGTTCCGGCTCTTATGACTTACTATTGGCGAATGAAAATGCCTGAAACTGGTCGTTATACTGCAATCGTAGAAGGGAATGCGAAACAAGCTGCAGCAGACATGGCAAGAGTTTTAGATATTGAAATTATAGCTGAGCAGGATAAGTTGGCAGAGTTTAAAGCCGCGAATAATTACTCTCTTTGGTCGCGCGAGTTTTTTGACAGACATGGTCGTCATTTGATTGGTACGATGAGTTGTTGGTTCTTATTAGATATTGCATTCTACAGTCAGAACTTAACACAAAAAGATATTTACCCTGCAATGGGACTAATTGATAAAGATGTTGCCATGAATGCTATTAATGAAGTTTTCCAAACTTCGCGTGCCATGTTTATTGTCGCCTTGTTTGGAACTTTCCCCGGTTATTGGTTCACCGTTTTCTTCATTGAAAAAATGGGACGACACAAGATCCAACTCATTGGTTTCTTCATGATGTCTTTGTTCATGTTTATTATTGGTGTCAAATATGATTACTTGAGAGACGAAAACAAGAACTTATTCGCTCTTTTATATGGCCTAACATTCTTTTTCGCGAACTTTGGGCCTAATAGTACTACATTTGTCTTGCCGGCTGAGCTGTTTCCAACGCGGGTGAGGTCTACCTGTCATGCTCTCAGCGCGGCGGCAGGGAAGGCTGGGGCTATGGTCAGTGCATTTGGGATACAGTACTACACAATCAAAGGTGAGACGCCGAAGATTAAAAAGGCAATGATAATTTTGGCTTTCACTAATTTGTTAGGATTCTTCTGCTCATTCTTGGTCACCGAAACTAAGGGACGATCTTTGGAAGAGATTTCGGGTGAGGATGGGAGAGAAAGTGAACTCACTGCAACACCAAATGATAGGGTTTCTGGGACTCATCAAGAATCAAGAACAGAGAAGATGTAA 1587 0.4234 MALEVLEALDSARTQWYHITAIVIAGMGFFTDAYDLFCITTVSKLLGRLYYFDPSSGKPGKLPPIVNNFVTGVALVGTLCGQLFFGYLGDKLGRKKVYGITLILMVACAICSGLSFGSSPKSVMTTLCFFRFFLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMVLSAVFKAYYDAPTFSKDPILSTQPEGDLLWRLVLMIGAVPALMTYYWRMKMPETGRYTAIVEGNAKQAAADMARVLDIEIIAEQDKLAEFKAANNYSLWSREFFDRHGRHLIGTMSCWFLLDIAFYSQNLTQKDIYPAMGLIDKDVAMNAINEVFQTSRAMFIVALFGTFPGYWFTVFFIEKMGRHKIQLIGFFMMSLFMFIIGVKYDYLRDENKNLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGAMVSAFGIQYYTIKGETPKIKKAMIILAFTNLLGFFCSFLVTETKGRSLEEISGEDGRESELTATPNDRVSGTHQESRTEKM 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01041 528 ProSitePatterns Sugar transport proteins signature 2. 133 158 IPR005829 GO:0016020|GO:0022857|GO:0055085
Trre1g01041 528 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 17 496 - -
Trre1g01041 528 FunFam Inorganic phosphate transporter 1-6 17 512 - -
Trre1g01041 528 Gene3D MFS general substrate transporter like domains 17 515 IPR036259 -
Trre1g01041 528 Pfam Sugar (and other) transporter 22 499 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre1g01041 528 NCBIfam phosphate:H+ symporter 6 501 IPR004738 GO:0005315|GO:0006817|GO:0016020
Trre1g01041 528 MobiDBLite consensus disorder prediction 496 528 - -
Trre1g01041 528 SUPERFAMILY MFS general substrate transporter 8 499 IPR036259 -
Trre1g01041 528 CDD MFS_PhT 22 491 - -
Trre1g01041 528 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 492 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01041 Trre-Chr1 7890345 7892265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01041 3 501 Inorganic Solute Cotransporters AT5G43360 62.035 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01041 K08176 - gmx:100805284 890.952