Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre1g00992 | ATGACTAGAGGTTTCAAAGACATGTTGGGCGAAGGAGGTTTTGGTACTGTTTTCAAGGGGAACCTACGTAGCGGTCCTTGCGTTGCAATCAAGATGTTGGGTAAGTCAAAAGGTAATAGGCAAGACTTCGTTAGTGAAGTCACAACAATTGGAAGAATACATCATTTGAATGTAGTGCAATTATTTGGATTTTGTATCGAGGGATCAAAACGAGCTCTAGCTTGTTTACGAATTCATGCCAAATGGATCTCTTGA | 255 | 0.4039 | MTRGFKDMLGEGGFGTVFKGNLRSGPCVAIKMLGKSKGNRQDFVSEVTTIGRIHHLNVVQLFGFCIEGSKRALACLRIHAKWIS | 84 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre1g00992 | 84 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 70 | IPR011009 | - | |
Trre1g00992 | 84 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 75 | - | - | |
Trre1g00992 | 84 | ProSiteProfiles | Protein kinase domain profile. | 3 | 84 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g00992 | 84 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 31 | IPR017441 | GO:0005524 | |
Trre1g00992 | 84 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 1 | 73 | IPR045874 | GO:0004672 | |
Trre1g00992 | 84 | Pfam | Protein tyrosine and serine/threonine kinase | 6 | 70 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre1g00992 | Trre-Chr1 | 7490492 | 7490746 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre1g00992 | 1 | 73 | Receptor kinase-like Gene Family | AT1G66980 | 53.425 | 7.33e-24 | 91.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Trre1g00992 | PK_Tyr_Ser-Thr | 1.5e-11 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre1g00992 | - | - | tpra:123893257 | 135.191 |