Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00991 ATGACTAGAGGTTTCAAAGACATGTTGGGCGAAGGAGGTTTTGGTACTGTTTTCAAGGGGAACCTACGTAGCGGTCCTTGCGTTGCAATCAAGATGTTGGGTAAGTCAAAAGCTCGTGGGATTGCTTATCTCCACCATGGATGTGAAATGAAAATTTTGCATTTTGATATTAAGCCCCACAATATCCTGCTTGACGAGAATTTTATTCCAAAGATATTTGACTTTGGACTTGCAAAGTTATCTCCGATAGAGAATAGCATTGTCACGATGACCGCATCAAAAGGAACAATTGGATATATGGCTCCGGAATTGTTCTACAAAAATATTGGAGGCGTGTCATATAAGGCTGACGTTTATAGTTTTGGGATGCTTTTGATGGAAATGGCAAGCAAGAGGAGAAACTTAAATTCCCATGCAGATCATTCAAGCCAGGTTTATTTTCCCTTTTGGATTTATGGTCAATTTGGAAATGGGGGAGAAATAGAACTTGGAGATATCACAGAGGACGATATGAAAATAGTAAAGAAGATGATCATTGTCGCTCTTTGGTGCATACAAATTAACCCAAATAATCGTCCCTCGATGAGTAAAGTAGTGGAGATGCTTGAAGGAGATATTGAAAGCCTTGAAATGCCTCCAGAGCCAACCATGTATCCGGATGAAGTGATTTCTGTGGATGAAACAACCAATTTAGACCGAACAATATCAAGCGATTTCATTAGTTCGAGTGATTCTAGAGAAAACATAACTAAACCTTTAATGGAGAACATTCATTGA 777 0.39 MTRGFKDMLGEGGFGTVFKGNLRSGPCVAIKMLGKSKARGIAYLHHGCEMKILHFDIKPHNILLDENFIPKIFDFGLAKLSPIENSIVTMTASKGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRRNLNSHADHSSQVYFPFWIYGQFGNGGEIELGDITEDDMKIVKKMIIVALWCIQINPNNRPSMSKVVEMLEGDIESLEMPPEPTMYPDEVISVDETTNLDRTISSDFISSSDSRENITKPLMENIH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00991 258 SUPERFAMILY Protein kinase-like (PK-like) 6 232 IPR011009 -
Trre1g00991 258 SMART serkin_6 3 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00991 258 Gene3D Transferase(Phosphotransferase) domain 1 28 217 - -
Trre1g00991 258 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 35 IPR045874 GO:0004672
Trre1g00991 258 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Trre1g00991 258 FunFam PR5-like receptor kinase 32 214 - -
Trre1g00991 258 Pfam Protein kinase domain 38 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00991 258 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00991 258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00991 Trre-Chr1 7490492 7491485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00991 1 217 Receptor kinase-like Gene Family AT1G66930 40.684 6.92e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre1g00991 Pkinase 1.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00991 - - tpra:123893257 354.369