Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00989 ATGTGGTGGCTGAGAGTGATACTGGTAGTAGTAGTACTACTGCTGCCGTTTCCCTGCCGTGCTAGTACTAAGCATGCTTGTCCGCCTTCATCTTGCGGCAAAATTTCTAACATAAGTTATCCATTTCGGTTAAAAAATGACCCAAAACACTGCGGAGACAACCGCTATGAGCTATCATGTGAAAATAATGTGACAACAATATTATATCTATACTCTTCAAAATATCATGTGCAGTCCATCAACTACAACAATTTCACAATCCGAGTGGTTGATCCCGGAATTCAACAATCTAATTGCTCTTCACTTCCTTTCTATTCATTATCTCGATCTGATTTCTGTGATACTTACACCAACAAAAACAACATCTACTACGACGACGACAACAACAACAACAACAATTGTGCGGATCCATACCAAGTCAGTTCCTCTGGAGAACGAGAACACATCGATGAAGTCATGGATTCCAATGGTCTTCTTTTTGAGCATATAGTATACTTGAATTGTAGCCATCAAGTAACTAACAATCATAAATATGTCGATACTGTTCCCTGCATCAATCAAAACTCAAAAGGGTATTATATTTATGCTATTGCTGGTGATTTAATTGCTCGAGATTTTCAAGTTGGTTGTCACATCGAATTAGTGGCTCCTACTTCTTGGTTCCGAGGTTTGAAAAGAAAACAAATTTCCTATGATGTCATTCATAAGGCGTTAGTGTATGGATTTGAGATTTCATGGATGAATGTTCCCTGTAAGAATCTTTGCGGAGATTCATTAAGTTGTTTCTTCAATTCCAGCCACCAACTTCAATGTGATGGCTTATGCCACACTTTTACCGGAGCTTGGACCACTGATAGTTGTGGCTTATGCCACATATATGTTTTTTTCTTCAAGGTATAG 900 0.3844 MWWLRVILVVVVLLLPFPCRASTKHACPPSSCGKISNISYPFRLKNDPKHCGDNRYELSCENNVTTILYLYSSKYHVQSINYNNFTIRVVDPGIQQSNCSSLPFYSLSRSDFCDTYTNKNNIYYDDDNNNNNNCADPYQVSSSGEREHIDEVMDSNGLLFEHIVYLNCSHQVTNNHKYVDTVPCINQNSKGYYIYAIAGDLIARDFQVGCHIELVAPTSWFRGLKRKQISYDVIHKALVYGFEISWMNVPCKNLCGDSLSCFFNSSHQLQCDGLCHTFTGAWTTDSCGLCHIYVFFFKV 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00989 299 PANTHER OS01G0690200 PROTEIN 7 277 - -
Trre1g00989 299 Pfam Wall-associated receptor kinase galacturonan-binding 27 91 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00989 Trre-Chr1 7488181 7489080 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00989 21 270 C3H Transcription Factor Family AT2G46495 25.292 1.27e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00989 - - tpra:123893257 326.25