Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00967 ATGGAATCATCATTCTTATGCTTCCTCCAAATTGTTTTTGTTATTGTTTTGATACTACTGCATCATAATCATCCAACATGTGATGCAATTACAAATTATAGTAATAACCAAACATATTGTCCACCTTCTTCATGTGGCAAAATCACAGACATAAAACATCCGTTTCGACTTAAGGATGATCCAACATCATGTGGTGATCCGAGGTACGAGTTATCCTGTGAAAACAACATCACAGCATTAGCTCTATTTTCGGGTAAATACTATGTGAAATCAATCGACTACAAAAACTACACAATTCGGTTAGTTGATCCTGGAATTGAAGAGGGTGATTGCTCAACGATTCCTCGCTATTACTTATACGCTTCTAATTTTACCGACTCTTACAATTATAGCTACAAGGAGGATCCATTTCAAACCTCACAGTACAGAATAATTTCTAGAAAGATTGATGATCCTTCTCCTACTTTGTCAATACCAATGTTCCAGCATGTAATATACATGAATTGTAGCAATCATATACGAGATGATGATCCGGTGTATGTGAATACAGCTTCTTGCATCAACGGTGGACATTTATATGCCATCGCTGGGGATGTGAAGGTCGGAAACTTGACAGATGATGACTGTCATGTGGAGATTATTACAGCGATATCTTTTTTCGGTTATAATTACAGCTCTGAGGATTGGGATATTCCGAATGAAAAGTTTCCATACAGCGATATTCATAGGATGTTGGTGGGTGGATTTGAGGTATCTTGGATGAGTGCTCCTTGTCAAGATCATTGTGGACAACCAGATTGTTATTGGAGTGAAATCAGTTCGAGTCTTCGATGCGACTCTGAACCATGTAAAACTACATTGAGATTTGCAGTTGGCTGTGAACCTCAATCAAAGCTGCGAATGTTTGTCGAAGGCATTATGTACGGAATTGCTAAAGGACTGCTACAAACAATAGGTGTGGCAATACACGGTGGATCTTATGGTATTTCTGAATCTAAACTTGGGATTGACATAGGAAAAATCATTGGAATGCATACATCAATGTATGAAAACATTGAAGACTTTCTTCAAGGAAACTCCCTCGTGCCAATAAGGTATTCATACAAAGAGATAAAGAAGATGACTAGAGGGTTTAAGGACAAATTGGGTGAAGGAGGATATGGTAAGGTTTATAAGGGAATGCTTCGCAGCGGCCCTTTGGTAGCCATAAAAATGTTGGGAAAACTTAAAGGTAAAGGAAATGGGGAGGATTTCATTAGTGAAGTTGCAACTATAGGAAGAATACATCACACCAATGTGGTGCGACTTATTGGATTTTGCGTTGAAGGATCAAAACGTGCTCTTGTTTATGATTTCATGCCCAATGGCTCCCTTGATAAATATATTTCCTCTACAGAAGAACATATTTCCTTAACTTATAAACAAATGTATGAGATATCTCTTGGGGTGGCTCGTGGAATTGCTTATTTGCATCAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCCCATAACATACTTCTTGACGAGGATTTAATCGCCAAAGTTTCAGATTTCGGTCTTGCAAAACTTTATCCTGTTGACAATAGTATTGTAACTTTGACTGGTGTAAGAGGAACATTTGGTTATATGGCTCCAGAATTATTCTACAAAAATATTGGCAAAGTTTCCTATAAGGCTGATGTATATAGTTTTGGAATGCTTTTAATGGAAATAGCAAACAGGAGAAGAAATTTGAACTCAAATGCTGATGATTCAAACCAAATTTTCTTTCCCTATTGGATTTACAATGAACTGATTGAAGCAAGGGAGATAGAAATAATGGGAGAAGCTACCGACGAGGAAAAGAAAAATGTGAAGAAGATGATCATAATTGCTCTATGGTGTATACAATTGAACCCCAATGATCGTCCTTCGATGGACAGAGTAATAAAAATGCTCGAAGGTGATACCGAAAACATTGAAATTCCTCCAAAACCTCCAAATCCAACTGAAATCATTCATGATAATGGTAGCTCTAGTGAATCTGTGTCAGGTGATAATGTCACTGGCTCAATTTGTTTTTCCTAA 2076 0.3724 MESSFLCFLQIVFVIVLILLHHNHPTCDAITNYSNNQTYCPPSSCGKITDIKHPFRLKDDPTSCGDPRYELSCENNITALALFSGKYYVKSIDYKNYTIRLVDPGIEEGDCSTIPRYYLYASNFTDSYNYSYKEDPFQTSQYRIISRKIDDPSPTLSIPMFQHVIYMNCSNHIRDDDPVYVNTASCINGGHLYAIAGDVKVGNLTDDDCHVEIITAISFFGYNYSSEDWDIPNEKFPYSDIHRMLVGGFEVSWMSAPCQDHCGQPDCYWSEISSSLRCDSEPCKTTLRFAVGCEPQSKLRMFVEGIMYGIAKGLLQTIGVAIHGGSYGISESKLGIDIGKIIGMHTSMYENIEDFLQGNSLVPIRYSYKEIKKMTRGFKDKLGEGGYGKVYKGMLRSGPLVAIKMLGKLKGKGNGEDFISEVATIGRIHHTNVVRLIGFCVEGSKRALVYDFMPNGSLDKYISSTEEHISLTYKQMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDEDLIAKVSDFGLAKLYPVDNSIVTLTGVRGTFGYMAPELFYKNIGKVSYKADVYSFGMLLMEIANRRRNLNSNADDSNQIFFPYWIYNELIEAREIEIMGEATDEEKKNVKKMIIIALWCIQLNPNDRPSMDRVIKMLEGDTENIEIPPKPPNPTEIIHDNGSSSESVSGDNVTGSICFS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00967 691 MobiDBLite consensus disorder prediction 654 691 - -
Trre1g00967 691 SMART serkin_6 376 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00967 691 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Trre1g00967 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Trre1g00967 691 FunFam PR5-like receptor kinase 453 661 - -
Trre1g00967 691 Pfam Protein kinase domain 379 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00967 691 MobiDBLite consensus disorder prediction 668 691 - -
Trre1g00967 691 ProSiteProfiles Protein kinase domain profile. 376 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00967 691 Gene3D Phosphorylase Kinase; domain 1 355 452 - -
Trre1g00967 691 SUPERFAMILY Protein kinase-like (PK-like) 361 650 IPR011009 -
Trre1g00967 691 FunFam serine/threonine-protein kinase PBS1-like 345 452 - -
Trre1g00967 691 Gene3D Transferase(Phosphotransferase) domain 1 453 658 - -
Trre1g00967 691 ProSitePatterns Protein kinases ATP-binding region signature. 382 404 IPR017441 GO:0005524
Trre1g00967 691 PANTHER RUST RESISTANCE KINASE LR10-RELATED 349 670 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00967 Trre-Chr1 7381313 7384123 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00967 8 681 Receptor kinase-like Gene Family AT1G66910 32.849 8.35e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre1g00967 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00967 - - mtr:25482268 1029.62