Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre1g00963 | ATGGAATCATTTTTATGTTACCTGCAAATATTTATGGTAATTGTTGTTCTACTACTGCCTCAACATCATCAAATAATATGTGATGCAAGTACTATTACTAATAACCAAACACATTGTCCACCTTCTTCATGCGGCCAAATCACAAACATAAAATATCCGTTTCGACTTAAGGATGATCCAACAACCTGTGGTGATCAGAGGTACGAGTTATCCTGCGAAAACAACATGACAGTGTTAACTCTATTTTCGGGTAAATACTATGTGAAATCAATCAACTACAAAAACTACACAATTCGGTTAGTTGATCCTGGAATTGAAGAAAGGGATTGCGCCTCTATTCCTCGCTATTACTTATACACTTCTAATTTCACAAGTTATTACAAAGACCAGGAGGAACCATATCAAACTACACAGTACAGAATAATTGGTCATAGATATCTTGATTATAGGAACTTACCAATGTTCCAGCACGTAATCTACATGAATTGTAGCAATCCTGTACGAGATGATCCTGTGTACGCGGATACAGCTTCTTGCATCAAGTCGAATTCCCAAGGTGGTCATGTTTACGCCATTGCTGGGGATTTGAAGGTTGGTAACTTAAAAGATGATGACTGCCACGTGGAGGTTGTTACCGCGATATCTTTTTTCAGTTATAAATACTACTCTGATGATCACGGCTCTGGTGGTGATTGGGACATTCCGAATGAAAAGTATTCGTACAGCGAAATTCATAGGATGTTGGTGGGTGGATTTGATGTTTCTTGGATCAGTGCTCCTTGTCAAAATCTCTGTGGAGACCCAGATTGCATTTTAAGTGAAAACACTTGGAGTCTTGGTTGCAACGATCAACAATATAAAACCCTATTAGAATTATTCCTCGATTGTGTTGGAACTCCATCAAAGCTTCCAATGTTCATCAAAGGTATTGTGTACGGCATTGTCAAAGGACTACAACAAGCAATAGGTGTGAGAACAAACGGTGGATTTGAAGGTAGATCAGATGAATCTCAACTTGGTTTTTTCATAGGAAATATCATTGGAACCTTTTTCTTGTCATCATACATTATATTTAGGCTTTTGTTGGGTTTCATAATTTTCACTACAAGTTTGGTACATATATATCGAACAAGGCATACATCAATGTATGAAAATATCGAAGATTTTCTTCAACGTAATTCCCTCATGCCTATAAGGTATTCATACAAAGATATAAAGAAGATGACTAGAGGCTTTAAGGACAAGTTGGGTGAAGGAGGCTTTGGTAAGGTTTATAAGGGAAAGCTACGAAGTGGGCCTTTCGTAGCCATAAAGATGTTGGGGAAACCTAAGGGTATTGCAAATGGACAAGATTTCATTAGTGAAGTTGCAACCATAGGAAGAATACATCACACCAACGTGGTGCGACTTGTTGGATTTTGTGTTGAGGGATCAAAACGTGCTCTTATTTATGATTTCATGTCCAATGGCTCTCTTGACAGATATATTTCCTCTACAAAAGATCACATTTCCTTAACATATAAGCAAATGTACGAGATATCTCTTGCAGTGGCTCGTGGGATTGCTTATTTGCATCAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCCCATAACATACTTCTTGACAAGGACTTCATCGCCAAAGTTTCAGACTTCGGTCTTGCAAAACTTTATCCTGTTGACAATAGCATTGTAACTTTGACTGCTGCAAGAGGAACGATTGGTTATATGGCTCCAGAATTGTTCTACAAAAATATTGGTGGAGTTTCCTATAAAGCTGATGTGTATAGTTTTGGAATGCTCTTAATGGAAATTGCAAACAGGAGAAGAAATTTGAACTCAAATGCAGATAAGTCAAGTCAAATTTTCTTTCCCTATTGGATTTACAATGAATTGATCGAAGAAAGGGAGATAGAAATATTAGGTGAAGCTACCGACGAAGAAAAGAAAAATGTGAAAAAAATGTTCATAATTGCTCTATGGTGTATACAATTGAACCCCAATGATCGTCCTTCAATGGACAAAGTAATAGAAATGCTCGAAGGAGATACCGATGACATTGTAATTCCTCCAAAACCTTCTCCATATCCAACTGAAATTATTCAAGATAATACAGTTATTAGCTCAAGTGAATCTATATCAGATGATGATGTCACCGGCTCAAGTAGTTTTCTTGAGGAAACTATAGTAGATCCTTTAAGTTAG | 2214 | 0.3704 | MESFLCYLQIFMVIVVLLLPQHHQIICDASTITNNQTHCPPSSCGQITNIKYPFRLKDDPTTCGDQRYELSCENNMTVLTLFSGKYYVKSINYKNYTIRLVDPGIEERDCASIPRYYLYTSNFTSYYKDQEEPYQTTQYRIIGHRYLDYRNLPMFQHVIYMNCSNPVRDDPVYADTASCIKSNSQGGHVYAIAGDLKVGNLKDDDCHVEVVTAISFFSYKYYSDDHGSGGDWDIPNEKYSYSEIHRMLVGGFDVSWISAPCQNLCGDPDCILSENTWSLGCNDQQYKTLLELFLDCVGTPSKLPMFIKGIVYGIVKGLQQAIGVRTNGGFEGRSDESQLGFFIGNIIGTFFLSSYIIFRLLLGFIIFTTSLVHIYRTRHTSMYENIEDFLQRNSLMPIRYSYKDIKKMTRGFKDKLGEGGFGKVYKGKLRSGPFVAIKMLGKPKGIANGQDFISEVATIGRIHHTNVVRLVGFCVEGSKRALIYDFMSNGSLDRYISSTKDHISLTYKQMYEISLAVARGIAYLHQGCDMQILHFDIKPHNILLDKDFIAKVSDFGLAKLYPVDNSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEIANRRRNLNSNADKSSQIFFPYWIYNELIEEREIEILGEATDEEKKNVKKMFIIALWCIQLNPNDRPSMDKVIEMLEGDTDDIVIPPKPSPYPTEIIQDNTVISSSESISDDDVTGSSSFLEETIVDPLS | 737 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre1g00963 | 737 | ProSiteProfiles | Protein kinase domain profile. | 410 | 691 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g00963 | 737 | FunFam | PR5-like receptor kinase | 487 | 695 | - | - | |
Trre1g00963 | 737 | PIRSF | SRK | 324 | 733 | IPR024171 | GO:0004674 | |
Trre1g00963 | 737 | PIRSF | SRK | 20 | 113 | IPR024171 | GO:0004674 | |
Trre1g00963 | 737 | Gene3D | Transferase(Phosphotransferase) domain 1 | 487 | 691 | - | - | |
Trre1g00963 | 737 | Gene3D | Phosphorylase Kinase; domain 1 | 385 | 486 | - | - | |
Trre1g00963 | 737 | Pfam | Protein kinase domain | 413 | 681 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g00963 | 737 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 383 | 703 | IPR045874 | GO:0004672 | |
Trre1g00963 | 737 | FunFam | serine/threonine-protein kinase PBS1-like | 378 | 486 | - | - | |
Trre1g00963 | 737 | ProSitePatterns | Protein kinases ATP-binding region signature. | 416 | 438 | IPR017441 | GO:0005524 | |
Trre1g00963 | 737 | SMART | serkin_6 | 410 | 683 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g00963 | 737 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 532 | 544 | IPR008271 | GO:0004672|GO:0006468 | |
Trre1g00963 | 737 | Pfam | Wall-associated receptor kinase galacturonan-binding | 39 | 102 | IPR025287 | GO:0030247 | |
Trre1g00963 | 737 | SUPERFAMILY | Protein kinase-like (PK-like) | 394 | 684 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre1g00963 | Trre-Chr1 | 7344707 | 7347624 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre1g00963 | 374 | 696 | Receptor kinase-like Gene Family | AT4G18250 | 47.130 | 2.38e-97 | 314 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Trre1g00963 | Pkinase | 2e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre1g00963 | - | - | mtr:25482268 | 1051.97 |