Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00943 ATGGTTGATCCAAAGAAAGGTGCACTTGCTGGGCTTGGCCCAACTTTGGTTGGGTTTGTGGTTGGGGCTAACATCTTGGCTGGTGGGGCTTTCTCGGCCGCTTCAATGAATCCGGCAAGATCTTTCGGTCCTGCTTTGGTTAGTGGAAATTGGACCGATCATTGGGTTTATTGGGTTGGGCCTCTTATTGGTGGCGGACTTGCCGGTTTCATTTATGAGAATTTCTTCATCAGTAGAGATCATGTTCCTCTAGTTGCAGATGAAGAAAGTTATTAG 276 0.471 MVDPKKGALAGLGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYENFFISRDHVPLVADEESY 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00943 91 Gene3D Glycerol uptake facilitator protein. 1 88 IPR023271 -
Trre1g00943 91 PRINTS Major intrinsic protein family signature 18 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre1g00943 91 PRINTS Major intrinsic protein family signature 55 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre1g00943 91 Pfam Major intrinsic protein 3 72 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre1g00943 91 SUPERFAMILY Aquaporin-like 2 84 IPR023271 -
Trre1g00943 91 PANTHER AQUAPORIN-8 2 79 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00943 Trre-Chr1 7169145 7169420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00943 1 89 Major Intrinsic Protein MIP AT2G25810 83.146 2.58e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00943 K09873 - gmx:100793258 176.792