Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00834 ATGTGGTTGCAAAAGAATCAATGGGACAAGAAGGATGGGGTGAGTGGAATAGTGGCAGTGGCAATAGATACAGATAAAGGGAGCCAAAATGCACTTAAATGGGCCATTGATCATCTCATCTCAAAAGGCTCAACTATTGTTCTCATCCATGTCAAGGTTAAACCAGCATTCTCATCTAATTCAACCCCAAGGGCAGGGATGATTGAGCAATGCACAATGGTGCCTAAAGAACCTGATGAAATAACCAAAGAAATTTTCCGTCCATATCGCGTCTTTTGTGCGCGAAAAGATATACATTGCAAGGACATTGTACTAGAACATGGAGATGTATCCAAAGCATTAATTGAATATACTTCTCAATCAGCAATTGAGCATTTGGTTATAGGCTCTTCCAACAAAAATGGTTTTCTCAAAAGATTCAAGGTGATAGATATTCCAGGGACTGTATCTAAAGGGGCACCAGATTTTTGTACAGTATATATTGTTGGTAAAGGAAAAATTCAATCCATGAGATCTGCTTCTAGACCTGCTCCTGCATTTTCACCTCTACAAACTCAACTTAGTCAAACTAGTAGTAGGTCAGATCATTCAGAACCTCGTATGCCGATGGCACCGATGGCAGTTAAAGCACCTGAGAGGAGATCATTTGAGGGACCGCCCCGTAGATCCCAAGATGGAGCAGATTCATTCAGGTCACCGTTCACTCGGAGACGTCCAAATGACAAGTCATATGGAGAACTTCCTATGCCAGATAGTGACATATCCTTTGTAAGCTCAGGAAGACCGAGTACAGATCGATTATTCCCTTCAGTGTTTAACCACAACTACAATTCAGAGTCAAGTTTTTCCAATCCTAGGCTATCATATAGTTCTGATACTGATGGAAACTATAGCTTTGAATCAATAAATTATGGAAGGAGGTCTATTGATATTGCCAATCCTGATTTCTCATCTTTCTCACATGATAGTGATGGACTTTCGTCTTCTGCTTCAAATGTGGATGACGTGGAGGCTGAAATGAGGAGACTAAAATTGGAGTTAAAGCAAACAATGGAAATGTATAGCACAGCTTGTAAAGAAGCACTCACAGCACAGCAGAAGGCTGTAGAACTCCAAAGATGGAAATTAGAGGAAGAAAGGAGATTGGAAGAGGCAAGAATGGCTGAAGAAAATGCATTGGCTGTTGTAGAAAAGGAAAAAGCAAAATCAAAAGCAGCCATTGAGACTGCTGAAGCACAAAAGAGGATTGCGGAACTTGAAGCACAAAAGAGAATTAGTGCAGAAATGAAAGCTTTAAGAGAAGCAGAAGAGAAAAGAAAAGTAGTTGATACTTTGTCAAACAAAGATGTGAGGTATAGAAGATATGCAATTGAAGATATTGAAGCTGCAACGAATTTTTTCGCCGACTCTCTTAAGATTGGAGAAGGTGGTTATGGTCCAGTTTATAAATGTCTTCTAGACCATACACCTGTCGCGGTTAAAGTTCTTCGTCCTGATGCACAACAAGGAAGGTCGCAATTTCAACGAGAGGTTGAGGTATTGAGTTGCATAAGGCATCCAAATATGGTTCTTCTCCTAGGAGCCTGTCCGGAATACGGCTGCCTAGTTTACGAGCACATGGCGAATGGAAGTTTGGACGATTGTCTCTTTTGTAGAGGAAACTCTCCACCACTACCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATTGGAACAGGCTTACTCTTCCTCCACCAAACAAAACCTGAGCCACTAGTACATAGAGACCTTAAACCGGCAAACATCTTGCTCGACCGCAACTATGTTGCAAAGATAAGTGATGTTGGTTTGGCAAGACTAGTACCTCCGTCAGTAGCAGACAACGTGACGCAATATCGAATGACGTCAGCTGCTGGAACATTCTGTTACATAGATCCTGAGTACCAACAGACAGGAATGTTGGGAGTGAAATCTGATATATACTCACTTGGGATAATTTTCTTGCAAATTTTGACGGCACGACCACCGATGGGATTGACACATCATGTTGGTAGAGCAATTGAGAGGGGAACATTTGATGAGATGTTGGATCCAAGAGTGACAGATTGGCCAGCTGAAGAGGCTCTTGGATTTGCTAAGATGGCTATAAAATGTGCCGAGTTAAGGAGGAAAGATAGACCTGATCTTGGTAAAGAGGTTATGCCTGAACTTAATAGGTTAAGAGAACTAGCTGAAAATAATGATCACCATTCTATGTTTAGTGGATTTATGAGTCCATCTACTCAGAGCCAAGTCTCTCTTCAAATGGATGGATCAAGTTCTCCACTTCCTTATTCTGGGGATAGCACAAGAAATACATCAAGCCCTCTTTGA 2352 0.4137 MWLQKNQWDKKDGVSGIVAVAIDTDKGSQNALKWAIDHLISKGSTIVLIHVKVKPAFSSNSTPRAGMIEQCTMVPKEPDEITKEIFRPYRVFCARKDIHCKDIVLEHGDVSKALIEYTSQSAIEHLVIGSSNKNGFLKRFKVIDIPGTVSKGAPDFCTVYIVGKGKIQSMRSASRPAPAFSPLQTQLSQTSSRSDHSEPRMPMAPMAVKAPERRSFEGPPRRSQDGADSFRSPFTRRRPNDKSYGELPMPDSDISFVSSGRPSTDRLFPSVFNHNYNSESSFSNPRLSYSSDTDGNYSFESINYGRRSIDIANPDFSSFSHDSDGLSSSASNVDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARMAEENALAVVEKEKAKSKAAIETAEAQKRIAELEAQKRISAEMKALREAEEKRKVVDTLSNKDVRYRRYAIEDIEAATNFFADSLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFCRGNSPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVGRAIERGTFDEMLDPRVTDWPAEEALGFAKMAIKCAELRRKDRPDLGKEVMPELNRLRELAENNDHHSMFSGFMSPSTQSQVSLQMDGSSSPLPYSGDSTRNTSSPL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00834 783 Gene3D Transferase(Phosphotransferase) domain 1 540 751 - -
Trre1g00834 783 Gene3D Phosphorylase Kinase; domain 1 444 539 - -
Trre1g00834 783 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 439 539 - -
Trre1g00834 783 CDD STKc_IRAK 473 733 - -
Trre1g00834 783 Gene3D HUPs 17 153 IPR014729 -
Trre1g00834 783 SMART serkin_6 467 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00834 783 PANTHER OS02G0152300 PROTEIN 17 762 - -
Trre1g00834 783 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 140 - -
Trre1g00834 783 CDD STK_N 17 165 - -
Trre1g00834 783 MobiDBLite consensus disorder prediction 744 783 - -
Trre1g00834 783 Coils Coil 359 438 - -
Trre1g00834 783 Coils Coil 326 353 - -
Trre1g00834 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Trre1g00834 783 SUPERFAMILY Protein kinase-like (PK-like) 451 722 IPR011009 -
Trre1g00834 783 ProSiteProfiles Protein kinase domain profile. 467 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00834 783 Pfam Universal stress protein family 18 139 IPR006016 -
Trre1g00834 783 MobiDBLite consensus disorder prediction 174 197 - -
Trre1g00834 783 FunFam U-box domain-containing protein 51 540 740 - -
Trre1g00834 783 MobiDBLite consensus disorder prediction 173 260 - -
Trre1g00834 783 Pfam Protein kinase domain 470 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00834 Trre-Chr1 6321374 6325732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00834 1 760 Receptor kinase-like Gene Family AT1G78940 57.289 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre1g00834 Pkinase 2.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00834 - - gmx:100779981 1127.46