Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00794 ATGAGATTGTTGTTTTCTTGCATATTTTTGCATGGCATGATCATAAAGGCGAAGGAATTGGAGCAGAGAACACCACGGCACCAAGGAAGAAATCAAGCTCGAACCGGACGTTTCAGAGGTCGATTCAGGACTATTAGAAATATTAAAAGGAAAAAATTTCTTTTACAAAGGTTTATCAAACTATCAAGTAGGTATGGCTATTGGACACTATGTTCTACCATATTTTCTTGTCAGGTTTGTATTGGGGATAGCACTATTTACTGCACTGCACTCTTAATATACAAATGGCGAAAAAGACATTTGTCGATATATGAATGTATTGAAATGTATCTACAACAACAAAACAACCTCATGCTGATTCGATATTCATACAAAGATATTAAGAAGATGACTAGAGGTTTCAAAGACATGTTGGGCGAAGGAGGTTTTGGTATTGTTTTCAAGGGGAACCTACGTAGCGGTCCTTGCATTGCAATCAAGATGTTGGGTAAGTTAAAAGGTAATGGGCAAGACTTTGTTAGTGAAGTCACAACAATTGGAAGAATACATCATTTGAATGTAGTGCAATTACTTGGATTTTGTATCGAGGGATCAAAACGAGCTCTTGTTTACGAATTCATGCCAAATGGATCTCTTGATAAATTTATTTTCCCTAAAGAAGGGAGTATGAATTTAAGTTATACCAGAATTCATGATATTGCAATTGGTGTAGCTCGTGGGATTGCTTATCTTCACCATGGATGTGAAATGAAAATTTTGCATTTCGATATTAAGCACCACAATATCCTGCTTGACGAGAATTTTATTCCAAAGATATCTGACTTTGGACTTGCAAAGTTATCTCCGGTAGAAAATAGCATTGTCACAATGACCGCAGCAAAAGGAACAATTGGATATATGGCTCCAGAATTGTTCTACAAGAATATTGGAGGCGTGTCATATAAGGCCGACGTTTATAGTTTTGGGATGCTTTTGATGGAAATGGCAAGCAAGAGGAGAAACTTAAATTCCCATGCAGATCATTCAAGCCAGGTTTATTTTCCCTTTTGGATTTATGGTCAATTTGGAAATGAGGGAGAAATAGAACTTGGAGATATCATAGAGGAGGATATGAAAATAGTAAAGAAAATGATCATTGTCGCTCTTTGGTGCATACAAATTAACCCAAATAATCGTCCCTCGATGAGTAAAGTAGTGGAGATGCTTGAAGGAGATGTTGAAAGCCTTGAAATGCCTCCAGAACCAACCATGTATCCGGATGAAGTGATTTCCACGGATGAAACAACCAATTTAGACCAAACAATATCAAGCGATTTTGTTAGTTCAAGTGATTCCGGAGAAAACATAACTAAACCTCTAATGAAGAACATTCATTGA 1377 0.3682 MRLLFSCIFLHGMIIKAKELEQRTPRHQGRNQARTGRFRGRFRTIRNIKRKKFLLQRFIKLSSRYGYWTLCSTIFSCQVCIGDSTIYCTALLIYKWRKRHLSIYECIEMYLQQQNNLMLIRYSYKDIKKMTRGFKDMLGEGGFGIVFKGNLRSGPCIAIKMLGKLKGNGQDFVSEVTTIGRIHHLNVVQLLGFCIEGSKRALVYEFMPNGSLDKFIFPKEGSMNLSYTRIHDIAIGVARGIAYLHHGCEMKILHFDIKHHNILLDENFIPKISDFGLAKLSPVENSIVTMTAAKGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRRNLNSHADHSSQVYFPFWIYGQFGNEGEIELGDIIEEDMKIVKKMIIVALWCIQINPNNRPSMSKVVEMLEGDVESLEMPPEPTMYPDEVISTDETTNLDQTISSDFVSSSDSGENITKPLMKNIH 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00794 458 ProSiteProfiles Protein kinase domain profile. 132 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00794 458 MobiDBLite consensus disorder prediction 436 458 - -
Trre1g00794 458 FunFam PR5-like receptor kinase 207 414 - -
Trre1g00794 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Trre1g00794 458 SMART serkin_6 132 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00794 458 Gene3D Transferase(Phosphotransferase) domain 1 207 417 - -
Trre1g00794 458 SUPERFAMILY Protein kinase-like (PK-like) 112 403 IPR011009 -
Trre1g00794 458 Gene3D Phosphorylase Kinase; domain 1 96 206 - -
Trre1g00794 458 ProSitePatterns Protein kinases ATP-binding region signature. 138 160 IPR017441 GO:0005524
Trre1g00794 458 PANTHER RUST RESISTANCE KINASE LR10-RELATED 106 424 IPR045874 GO:0004672
Trre1g00794 458 Pfam Protein tyrosine and serine/threonine kinase 135 402 IPR001245 GO:0004672|GO:0006468
Trre1g00794 458 MobiDBLite consensus disorder prediction 436 450 - -
Trre1g00794 458 FunFam serine/threonine-protein kinase PBS1-like 105 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00794 Trre-Chr1 5981411 5987262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00794 118 434 Receptor kinase-like Gene Family AT5G38280 50.155 2.80e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre1g00794 PK_Tyr_Ser-Thr 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00794 - - tpra:123893257 602.823