Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00760 ATGGTTGCTGCATTATTCCTGTTGGTAGAAGCAGTTGCATTTGATCAACCCCAACAAGTCCTACCAGGCTGCAATTACACTTGTGGAGATATACAAATTCCATATCCATTTGGCATAGGAAATTCAACAACACAAGATCATACTCCATGTTACATGGATTCCAAATTTAATCTCACTTGTGTAAACAATTCGACATTAATCAGTGGTAAGCGTATCCAAGTCCTAGACATAAATCCCAAAGGTCAAATGGTAATGAATTTTTTTGTCTCGCATCTCTGTACTAATAGTAATAATACTGAAGAAGCGAATACACCTTTTCTCATAGTTCCTTCTCTCACAGTTTCAAGCACAGAAAACAAATTCATAACTGTTGGTTGCGACAGTTACGGATATCTCAACAGTAATTTCAATGGTGCCACTTATTCAACAGGGTGCTTAACAAGGTGTTATGATTTTGATCCTAAAATGGTAATTGGGAATAACACTGGAAAATGCACAGGCTTAGGGTGTTGCCAAGTGGATATTCCTCCACTTATGAAAAATATCACTATACAGACATTCAAATTCCCAACTTCTACAACCTCTCAGGAAGATTGTAGCTATTCCTTTATTGCAAAACAAGGATCCTATAATTTTTCTGTAGAGCATATAAATAATCTACCTAATCAAACTTTCCCCTTGGTTGTTAATTGGGCTATTACAAGTGAATCATGTCAAATAGCACAAACTACAACTAGCTACGCCTGCAAGGAAAATAGTGAATGTGTCGATGATGATTTAGATTATGACGGTTACAGATGCAAATGTTCGGAAGGTTTTGAAGGAAATCCATACCTTCCTGGAGGTTGCACAGACATTGACGAATGTGCAACAAATTTACATGGATGCAAAAACAGCGCAAATTGTAACAACACTGCTGGGAATTACACTTGTTTCTGTCCTGTGGGCCAAACCGGAGATGGAACAAAAGAAGGAGGGTGCCAACTACCTGATGGAAATGCATATCCAATAGTACCTACTATCCTTGGAGTGGGAGCAGCATTAATTGTTCTATTTGTGGGGATAATTTTCACCTTAATATACCAAAAGAGGAAACTTACCAAATTGAAAGAGAAATTCTTTAGGCAGAATGGTGGTTCTATTTTGGAACAGAAACTTCTTCAAAGAAAAGATTCATCTCAAATAGCTAATATTTTTAAAGAAAATGAACTAAGGAAAGCCACTAACAACTATGACGAGAGCTTAATCATAGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGAGAACTAGATGATAATAGAATTGTTGCTATCAAAAAGTCCAAAACAATAGATGAAAGCCAGATTGAGCAATTCATTAACGAGGTGGATGTTGTCTCCCAAATAAATCACAGGAATGTGGTTAAACTCTTAGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAATTTGTTAGCAATGGTACTCTTTCTGATTTTATACACACACAAGGTAAAGTGAATAATCAAACTTGGAAAATTCGTCTTAAGATAGCAGCAGAGGTAGCCGGAGCTTTGTCATATCTACATTCAGCGGCCTCAATACCAATTATCCACAGAGATGTCAAGAGTGATAACATTCTCTTAGATGGTACCAGCACTGCCAAAGTATCAGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGACCCAGAGTATATGCAAACAAGCCAATTGACTGAAAAAAGTGATGTATATAGCTTTGGCGTAGTTCTTGTGGAGCTGCTAACAGGGGAGAGACCTTTTAGTTTTGGTAGGCCAGAAGAGAGAAGAAGTCTTGCTATGCATTTTCTGTCCTGCTTGAAAAAGGATAATGTGTTTGATGTCATTCAAGAAGGTATGTTGAATGAAGAAAACAAACAAGAGATCAAGGAGGTAGCTGTTCTTGCGGCAAAGTGTTTGAGACTAAGAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTAGAGGGAATGAGGTTAGTGGATAAGCATTCTTGGATCAACGAAGACCTAAATGTAGCGGAGAGTCACTACTTGCTTCATGAACCATCATCTAGCATTTATGAACTTGGTGATAGCAGCAAACGTGGAGATATTGGGTATGACAGCTTGAAAGATCATGTATTGATTGCCTTGGATGATGGAAGATGA 2229 0.3813 MVAALFLLVEAVAFDQPQQVLPGCNYTCGDIQIPYPFGIGNSTTQDHTPCYMDSKFNLTCVNNSTLISGKRIQVLDINPKGQMVMNFFVSHLCTNSNNTEEANTPFLIVPSLTVSSTENKFITVGCDSYGYLNSNFNGATYSTGCLTRCYDFDPKMVIGNNTGKCTGLGCCQVDIPPLMKNITIQTFKFPTSTTSQEDCSYSFIAKQGSYNFSVEHINNLPNQTFPLVVNWAITSESCQIAQTTTSYACKENSECVDDDLDYDGYRCKCSEGFEGNPYLPGGCTDIDECATNLHGCKNSANCNNTAGNYTCFCPVGQTGDGTKEGGCQLPDGNAYPIVPTILGVGAALIVLFVGIIFTLIYQKRKLTKLKEKFFRQNGGSILEQKLLQRKDSSQIANIFKENELRKATNNYDESLIIGRGGFGTVFKGELDDNRIVAIKKSKTIDESQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSDFIHTQGKVNNQTWKIRLKIAAEVAGALSYLHSAASIPIIHRDVKSDNILLDGTSTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGERPFSFGRPEERRSLAMHFLSCLKKDNVFDVIQEGMLNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLVDKHSWINEDLNVAESHYLLHEPSSSIYELGDSSKRGDIGYDSLKDHVLIALDDGR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00760 742 CDD STKc_IRAK 417 684 - -
Trre1g00760 742 SUPERFAMILY Protein kinase-like (PK-like) 394 682 IPR011009 -
Trre1g00760 742 ProSitePatterns Calcium-binding EGF-like domain signature. 285 311 IPR018097 GO:0005509
Trre1g00760 742 Pfam Protein tyrosine and serine/threonine kinase 417 681 IPR001245 GO:0004672|GO:0006468
Trre1g00760 742 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 302 313 IPR000152 -
Trre1g00760 742 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Trre1g00760 742 SMART egfca_6 285 328 IPR001881 GO:0005509
Trre1g00760 742 Gene3D Plasmodium vivax P25 domain 228 331 - -
Trre1g00760 742 FunFam Wall-associated receptor kinase 2 487 704 - -
Trre1g00760 742 FunFam Fibrillin 2 281 324 - -
Trre1g00760 742 SUPERFAMILY EGF/Laminin 285 320 - -
Trre1g00760 742 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 689 IPR045274 GO:0007166
Trre1g00760 742 Gene3D Transferase(Phosphotransferase) domain 1 487 702 - -
Trre1g00760 742 FunFam Wall-associated receptor kinase 2 381 486 - -
Trre1g00760 742 Pfam Wall-associated receptor kinase galacturonan-binding 24 83 IPR025287 GO:0030247
Trre1g00760 742 Pfam Calcium-binding EGF domain 285 322 IPR001881 GO:0005509
Trre1g00760 742 SMART serkin_6 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00760 742 CDD EGF_CA 285 320 - -
Trre1g00760 742 Gene3D Phosphorylase Kinase; domain 1 376 486 - -
Trre1g00760 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Trre1g00760 742 ProSiteProfiles EGF-like domain profile. 285 323 IPR000742 -
Trre1g00760 742 ProSiteProfiles Protein kinase domain profile. 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00760 742 SMART egf_5 237 284 IPR000742 -
Trre1g00760 742 SMART egf_5 288 328 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00760 Trre-Chr1 5753304 5756045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00760 2 742 Receptor kinase-like Gene Family AT1G21230 43.989 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre1g00760 PK_Tyr_Ser-Thr 2.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00760 - - tpra:123893723 1375.92