Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00756 ATGGCATACCAAAACCATAATCCTTCAATTCAAACTTCAGATCTTGAAGCTCCTGAAATCACTCCAACATCTCAAACAAACCATTCAGAAACAAAAAGTTTCACAGCCAAATATGCAGTCCAAAAAGTGAAAAACAATTTGATTTTTCGTTCAAAATGGGCTGAAATTAATGGTGCCATGGGTGACCTTGGCACCTATATACCCATAATCTTGGCTCTCACTCTAGCTAAGGACCTTAACCTTGGCACCACATTGATTTTCAATGGTATCTACAACATCATAACTGGTGTCATTTATGGAATTCCTATGCCGGTACAGCCGATGAAGTCCATCGCTGCACAGGCCTTATCGGACAAAGATTTCGGAATACCAGAAATCATGACTGCTGGAATCTTAACCGGAGGCACGCTGTTCGTACTCGGTATCACGGGATTAATGCAGGTGGTATACAAATTAATTCCTTTATCTGTAGTAAGGGGAATTCAATTAGCACAAGGTTTGTCATTTGCTTTAACAGCTGTTAAATATGTAAGAAAAGTGCAAGATCTTCCAAAGTCTAAATCTTTAGGCCAAAGACCTTGGTTTGGATTAGATGGGTTGGTTCTAGCTATTGTTTGTGCTTGTTTCATTGTGATTGTGAATGGAGCCGGCAAAAAAAATCGCGGCTGTTGCGGCGATCCACAAAGTGATGATTTAGATGGCCAGACCCAAAAGATTGATAATGAAAATGGAAGAAAAGGTAAAATCAATAGATTAAGAAAAATTGTTTTTTCACTTCCTTCTGCTTTATTAGTCTTTGTGTTGGGAGTTGTTTTGGTGTTTATAAGAAAACATGAAGTGGTGCATGAAATTAAATTTGGACCCTCTTCAATAGAAATAGTGAAATTCACTAAACATGCTTGGAAGAAAGGTTTTATCAAAGGTGCAATTCCACAACTTCCATTATCAGTTTTGAACTCTGTGATAGCTGTTTGTAAATTATCAACAGATCTTTTTCCTGAAAAGGAATTTTCAGTTACATCAATTTCAGTTACAGTTGGATTAATGAATTTAGTTGGTTCTTGGTTTGGTGCTATGCCAACATGTCATGGTGCTGGTGGATTAGCAGGACAGTATAAATTTGGTGGAAGAAGTGGAGGTTGTGTGGCACTTCTTGGTGTTGCAAAATTGGTATTAGGATTGGTTTTAGGTACTTCTTTGGCACATATATTGAAGATGTTTCCTGTTGGAATATTAGGTGTGTTACTTTTGTTTGCTGGTATTGAATTAGCTATGTGTGCTAGAGATATGAATAGTAAAGAAGATTCATTTGTTGCACTTATTTGTACTGCTGTTTCATTGGTTGGATCAAGTGCTGCTCTTGGATTTTTAGTTGGAATGATTGTTTATGTCATTCTTAAGTTAAGGAATTGGACAAGTGATAAACCACTTTCTACTATTTGGAACCAGAAAAGTCCAAATTAA 1464 0.3689 MAYQNHNPSIQTSDLEAPEITPTSQTNHSETKSFTAKYAVQKVKNNLIFRSKWAEINGAMGDLGTYIPIILALTLAKDLNLGTTLIFNGIYNIITGVIYGIPMPVQPMKSIAAQALSDKDFGIPEIMTAGILTGGTLFVLGITGLMQVVYKLIPLSVVRGIQLAQGLSFALTAVKYVRKVQDLPKSKSLGQRPWFGLDGLVLAIVCACFIVIVNGAGKKNRGCCGDPQSDDLDGQTQKIDNENGRKGKINRLRKIVFSLPSALLVFVLGVVLVFIRKHEVVHEIKFGPSSIEIVKFTKHAWKKGFIKGAIPQLPLSVLNSVIAVCKLSTDLFPEKEFSVTSISVTVGLMNLVGSWFGAMPTCHGAGGLAGQYKFGGRSGGCVALLGVAKLVLGLVLGTSLAHILKMFPVGILGVLLLFAGIELAMCARDMNSKEDSFVALICTAVSLVGSSAALGFLVGMIVYVILKLRNWTSDKPLSTIWNQKSPN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00756 487 PANTHER - 27 477 IPR031563 GO:0015098|GO:0015689
Trre1g00756 487 Pfam Molybdate transporter of MFS superfamily 54 169 IPR031563 GO:0015098|GO:0015689
Trre1g00756 487 Pfam Molybdate transporter of MFS superfamily 305 423 IPR031563 GO:0015098|GO:0015689
Trre1g00756 487 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00756 Trre-Chr1 5711513 5713182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00756 24 478 Inorganic Solute Cotransporters AT2G25680 66.522 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00756 - - gmx:100779658 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00756 1 5711513 5713182 Trre1g00756 1 5711513 5713182 ECH
Trre1g00756 1 5711513 5713182 Trre5g05308 5 53949668 53951074 PCT