Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00755 ATGGTTGCTGCATTTGCCCTGTTGGAAGACACAATTGCAGCTGATCAACCCCAACAACAAGTCCTACCAGGCTGCAATAACACTTGTGGAGATATACTAGTTCCATATCCATTTGGCATGGGATATTCAACAACACAAGATCATACACCATGTTACATGGATTCCAAATTTGAGCTCACTTGTGTAGACAACTCAAAATTAATCCGTGGTAAGAATATCGAAGTCCTAAACTTAACCCAAGGTCAAATGGTAATGAATTTTTTTGTCTCACATCTTTGTCCTGATAGTAATAATACTGAAGAAGCGAATCAACCTTTTCTCAGAGTTCCTTCTTTCACAATTTCAAGCACGGAAAACAAATTCATAACTGTTGGTTGCGACAGTTACGGATATCTCAACAGTAATTTCAATGGTGCCACTTATTCAACAGGGTGCTTAACAAGATGTTATGGTTTTGATCTTGAAATGGCAATTGGGAAAAGTACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAATAGATATTCCTCCACTCATGAAAAATATCACTATACAAACATTTAAATTCCCAAATTCTACACAATCTCAAGAAGGTTGTAGCTATTCCTTTATTGCAAAACAAGGATCCTATAATTTTTCTGTAGAGCATATAAATAATCTACCTAATCAAACTTTCCCCTTGGTGGTTAACTGGGCTGTTACAAATGAATCATGTCAAATAGCGCGAACTACAGATAGCTATGCCTGCAAGGAAAATAGTGAATGTGTCCATGATGATCCAGATTATGACGGTTACAGATGCAAGTGTTTGGAAGGTTTTGAAGGAAATCCATACCTTCCTGGAGGCTGCACAGACATTAACGAATGTATAACAAATAAACATGGATGCAAAAGTAGCGCAAATTGTCATAACACTCCTCCTGGGAGTCACACCTGTTTTTGTCCTGTGGGGCAAACCGGAGATGGAACAAAGGAAGGAGGGTGCCAAATACCTGAACTACCTGATGGAAATGCATATCCAATTTTACCTACTGTCCTTGGAGTAGGAGCAGCAATTATTGTTCTATTTGTGGGGATAATTTCCTTCTTAGTATACCAAAAGAGGAAAATTACCAAATTGAAAGAGAAATTCTTTAGGCAGAATGGTGGTTCTATTTTGGAACAGAAACTTCTTCAAAGAAAAGACTCATCTCAAGTAGCTAATATTTTCAAAGAAAATGAACTAAGGAAAGCAACCAACAATTATGACGAGAACTTAATCATTGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGAGAACTAGATGATAATAGAATTGTTGCTATCAAAAAGTCCAAAACAATAGATGAAAGCCAGATTGAGCAATTCATTAACGAGGTGGATGTTGTCTCCCAAATAAATCACAGGAATGTGGTTAAACTCTTAGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAATTTGTTAGCAATGGTACTCTTTCTGATTTTATACACAAACAAAGTAATAAGGTGAATAATGAATCATGGAAAATTCGTCTTAAGATAGCAACAGATGTAGCTGGAGCTTTATCATATCTACATTCAGCTGCTTCAATAGCAATCATCCACAGAGATGTCAAGAGTGATAACATTCTCTTAGATGGAGCCAACACTGCCAAAGTAGCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGACCAAACTGAAATAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGACCCAGAGTATATGCAAACAAGCCAATTGACCGAAAAAAGTGATGTATATAGCTTTGGCGTAGTTCTTGTGGAGCTGCTGACAGGGGAGAGACCTTTTAGTTTTGGTAAGCCAGAAGAGAGAAGAAGTCTTGCTATGCATTTTCTGTCCTGCTTGAAAAAGGAAAATGTATTTGAAATTATTCAAGATGGTATGTTGAATGAAGAAAACAAACAAGAGATGAAGGAGGTAGCTGTTCTTGCGGCAAAGTGTTTGAGACTAAGAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGGTTAATGGATAAGCACTCCTGGATCAACGAAGACCTAAATGTAGAGGAGAGTCGCTACCTGCTTCATGAATCATCATCTAGCATTTATGAACTTGGTGATAGCAGCAAACGCGGAGATATTGGGTATGACAGCTTGAAAGATCATGTATTGATTGCCATGGACGATGGAAGATGA 2244 0.3828 MVAAFALLEDTIAADQPQQQVLPGCNNTCGDILVPYPFGMGYSTTQDHTPCYMDSKFELTCVDNSKLIRGKNIEVLNLTQGQMVMNFFVSHLCPDSNNTEEANQPFLRVPSFTISSTENKFITVGCDSYGYLNSNFNGATYSTGCLTRCYGFDLEMAIGKSTGKCTGLGCCQIDIPPLMKNITIQTFKFPNSTQSQEGCSYSFIAKQGSYNFSVEHINNLPNQTFPLVVNWAVTNESCQIARTTDSYACKENSECVHDDPDYDGYRCKCLEGFEGNPYLPGGCTDINECITNKHGCKSSANCHNTPPGSHTCFCPVGQTGDGTKEGGCQIPELPDGNAYPILPTVLGVGAAIIVLFVGIISFLVYQKRKITKLKEKFFRQNGGSILEQKLLQRKDSSQVANIFKENELRKATNNYDENLIIGRGGFGTVFKGELDDNRIVAIKKSKTIDESQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSDFIHKQSNKVNNESWKIRLKIATDVAGALSYLHSAASIAIIHRDVKSDNILLDGANTAKVADFGASRLVPLDQTEIATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGERPFSFGKPEERRSLAMHFLSCLKKENVFEIIQDGMLNEENKQEMKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLMDKHSWINEDLNVEESRYLLHESSSSIYELGDSSKRGDIGYDSLKDHVLIAMDDGR 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00755 747 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 695 IPR045274 GO:0007166
Trre1g00755 747 SMART egf_5 237 284 IPR000742 -
Trre1g00755 747 SMART egf_5 288 329 IPR000742 -
Trre1g00755 747 Gene3D Transferase(Phosphotransferase) domain 1 491 709 - -
Trre1g00755 747 CDD EGF 288 323 - -
Trre1g00755 747 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Trre1g00755 747 Gene3D Phosphorylase Kinase; domain 1 380 490 - -
Trre1g00755 747 SUPERFAMILY EGF/Laminin 283 321 - -
Trre1g00755 747 CDD STKc_IRAK 421 689 - -
Trre1g00755 747 SMART serkin_6 415 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00755 747 FunFam Wall-associated receptor kinase 2 385 490 - -
Trre1g00755 747 Pfam Protein tyrosine and serine/threonine kinase 420 686 IPR001245 GO:0004672|GO:0006468
Trre1g00755 747 SMART egfca_6 285 329 IPR001881 GO:0005509
Trre1g00755 747 SUPERFAMILY Protein kinase-like (PK-like) 397 687 IPR011009 -
Trre1g00755 747 FunFam Wall-associated receptor kinase 2 491 709 - -
Trre1g00755 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Trre1g00755 747 Gene3D Laminin 236 287 - -
Trre1g00755 747 Gene3D Laminin 288 328 - -
Trre1g00755 747 ProSiteProfiles EGF-like domain profile. 285 324 IPR000742 -
Trre1g00755 747 ProSiteProfiles Protein kinase domain profile. 415 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00755 747 Pfam Wall-associated receptor kinase galacturonan-binding 25 81 IPR025287 GO:0030247
Trre1g00755 747 FunFam Fibrillin 2 281 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00755 Trre-Chr1 5705241 5707981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00755 1 747 Receptor kinase-like Gene Family AT1G21230 43.931 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre1g00755 PK_Tyr_Ser-Thr 6.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00755 - - tpra:123893723 1298.49