Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00724 ATGGCTAAGAGATCAGATTTTGCACAGAAGCTTCTCGATGATTTGCGCCTAAGGAAAGAACGAATGGCTGCTACTACTACTACATCACATTCTCACAACTCAAACCAATCCCGCCATTTGCCTATAGATGCATATGCATACACCAAGCAAACCTACAGAAATGGGGAGATGGTAAATATGTATAGCAGAAAGCAGAGATCTGTAAAGAGTGAGGGAAACTCGTCAAATCAGATTATTATTCCATACGGGAAGAAAGCCTTTGAGCATGATAATCGAGGGAAACTAAGAAGAGCTGATTTGTCTTTCACCAATTCAATTTTGGGTTTCCTTCAACAAATTCAAAGGGGAAAAATGGATAGAGGAAGCAACTTGGAAAGGCAACTAGCTTCAACTAGCCAAAGCCAAACCCTCTCTCTTGTGCAGATAAATGAGATATCAAAAGGTGCACACAAACTAAATCACATATTGAGAGCTTGCTTCTCCAATGGTGTTAACATGGATACATATTCATTCAATTTTGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAACAATCCCTCAGGATGCTAGTAGACCTGCAGAAAAGTTCAACCTCGCAAGCGCAGAACAAAAATCGAATCACACTATTAGAAGAGAAGGAAGAGGAGGAGGAGGATAGGAGAATGGAGAAAATGCAACTGGCACATCCAACTTTCTCGTTTGACAACAAGATGCAGAGACCAATTACCATCACTAACTCTAAGGAAGCCAGAAAGATAAAAGATTTTCAGCAGAAACGAATATCTACTAATACTAGTAGAGCTGCTGACATTTCAAACCAGACGGTCGACAAGGGAAGGATTCCAAACGTAATAGCCAAACTAATGGGGCTGGAAAACCATCCCGAGAAGGACTCGGATAATAGTAATATTGCATCATCCAAGCACTCTGCCAAAGGAAGCAGCAGCACTACACTGAAGAGCAAACAAATAGACAATTTGATCAAAAACCAAAAAGTGGCTGTTGGATCCTTCAAAAACCAAAAGGCTACCTATTATTCTGAGTCTGAGGTGGCTGGAATAAAAGCATTGAAGGGCTTTGACGAGGCCAGCATCATCAACAGTTCTTCTCGTCAAAATTATGTTGAGGTGATGATGGGAAGGAAACAGGATCACCCACATAACAGTGGCGCGTTGATCAAGGGAAGAAGCACCAATGGCAATGATGTTGGTCAAAATCTAAATAAAATGCATGAAAGAAGATCCCAAGTTACAAACAAGCACATGCAGATGAACAATGAAAACAAGTCTCGGGATCATCTCGTAGTTCAAAAGTCAATACTCTCCACAGGTGGTGGAGGGAGTGAAATGACACCCAAGAATTCACCAAAACAATCCACCAATAATGTTCAGAAGAAGAAAAAGAAATCATCCATAAACCAACCCACACCATCCAAGAAATCAAGTGATGACCATGATCTAGTCGCATCCAATGAGAAAGTAAAAGAAATTATTAATAGGAAGAAGAAGTCCTCCCCAAGATATCCAGAATTTGAACGAGCTAATGGGAGGCAAACACTCAAGGATCATAAACTCGCGACCAGCAACAAAATAAAGCCTGAAAAGATTGAACAAATTTTCAGTAGAAGTAGACAGGAAGCATGTGATAGAGCATCTGGCAAATTCAATGTCTTAAATGGAGCAGACCAAAAAAGGTTTAGCATGTTCGTTGAACAGGAACTGCTTCCTCCTACTACATTATACAATTCTGGCGGTGGTGGAGTTTTACAAGAACCAGCCAATGATTTGAAATATCAAGCTGTGCAACGGATAGCAATCAATTTGCAAGATCAAGCTGTTCCTGAGGCACCACATGAAGGATTCAAGACTAGTGAAGTTGCCTACCATAAAAGTAAAACAAACGGAGTTCTGGAAGACAGAATGGTTGTGAAACTACAGGATCAAAATATAAGCATCCAACAACCACTAACAGAAAGTGAAAACTCCCTCAAGTGGATTTTGGTCATGAGTCAATTATTCGTCAACACCGCAGAAGCACTTTTCAGACTAAACATCCCGTTTGGTATTCTTCAAGGTGGTCGTCAAGACAGTCAAGACCAAAATAGCAAACTCATATTAGATTGCGGATATGAAGTGATGAAAAGAAAGGGGATACGGCAGGAACTTAAAGTTCATACTTGTTCAAAGATATCATCAATCACTAGTACTTTTAACTTAATAAGATCCCTAGATGACTTGGTTAGGAAGTTGAATGAGGACATGGAGAAGCTTAAATTCTACGGAAGGAAAAAAAGCAGTCAAGTTGATGTAGAAGATTACCTGCCTAAGATGCTTGAGCATGATGTCTATGATAAATGTCCAGACATAGACTGCATGTGGGATTTGGGTTGGAATGATGAGACATTTGCATTTATCGAAAAATATGATGTTATAAGGGATACAGAAAAGCATATCCTTAGTGTACTTCTCGATGAGATCACCAAAGATTATTGCACGTTCAAGGAGGATTGA 2514 0.3982 MAKRSDFAQKLLDDLRLRKERMAATTTTSHSHNSNQSRHLPIDAYAYTKQTYRNGEMVNMYSRKQRSVKSEGNSSNQIIIPYGKKAFEHDNRGKLRRADLSFTNSILGFLQQIQRGKMDRGSNLERQLASTSQSQTLSLVQINEISKGAHKLNHILRACFSNGVNMDTYSFNFAKELLQGAIDLEQSLRMLVDLQKSSTSQAQNKNRITLLEEKEEEEEDRRMEKMQLAHPTFSFDNKMQRPITITNSKEARKIKDFQQKRISTNTSRAADISNQTVDKGRIPNVIAKLMGLENHPEKDSDNSNIASSKHSAKGSSSTTLKSKQIDNLIKNQKVAVGSFKNQKATYYSESEVAGIKALKGFDEASIINSSSRQNYVEVMMGRKQDHPHNSGALIKGRSTNGNDVGQNLNKMHERRSQVTNKHMQMNNENKSRDHLVVQKSILSTGGGGSEMTPKNSPKQSTNNVQKKKKKSSINQPTPSKKSSDDHDLVASNEKVKEIINRKKKSSPRYPEFERANGRQTLKDHKLATSNKIKPEKIEQIFSRSRQEACDRASGKFNVLNGADQKRFSMFVEQELLPPTTLYNSGGGGVLQEPANDLKYQAVQRIAINLQDQAVPEAPHEGFKTSEVAYHKSKTNGVLEDRMVVKLQDQNISIQQPLTESENSLKWILVMSQLFVNTAEALFRLNIPFGILQGGRQDSQDQNSKLILDCGYEVMKRKGIRQELKVHTCSKISSITSTFNLIRSLDDLVRKLNEDMEKLKFYGRKKSSQVDVEDYLPKMLEHDVYDKCPDIDCMWDLGWNDETFAFIEKYDVIRDTEKHILSVLLDEITKDYCTFKED 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00724 837 MobiDBLite consensus disorder prediction 293 321 - -
Trre1g00724 837 MobiDBLite consensus disorder prediction 393 407 - -
Trre1g00724 837 MobiDBLite consensus disorder prediction 384 407 - -
Trre1g00724 837 MobiDBLite consensus disorder prediction 305 321 - -
Trre1g00724 837 MobiDBLite consensus disorder prediction 442 479 - -
Trre1g00724 837 MobiDBLite consensus disorder prediction 442 490 - -
Trre1g00724 837 Coils Coil 201 221 - -
Trre1g00724 837 PANTHER OS01G0228800 PROTEIN-RELATED 414 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00724 Trre-Chr1 5440047 5442924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00724 655 830 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 46.111 1.63e-38 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00724 - - mtr:11406578 1202.19