Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00718 ATGGGACCATTTAATGGAATAACTCAAGATTTCAAAGGAAGACTTGAAGTTTACAAACAAGATTGGGCTTGTGCAATCTCTACTGGCTTTAGAATATTTGCCCCAACTTTCTACATATTCTTTTGTTCTGCACTTCCTGTTATTGCTTTTGGAGAGCAACTTTATAGAGATACAGATGGAACCTTGAGCACAGTTGAAACATTGACATCTACGGCTATGTGTGGAATTATCCATTCAATATTTGGTGGTCAACCTTTACTGATTTTAGGAGTTGCTGAACCAACTGTTATCATGTATACCATTCTATACAGTTTTTGCTCAAAAAGACCAGAATTAGGTTCCAAGCTGTTTTTGGCTTGGGCTGGTTGGGTTTGTGTTTGGACATCATTAATGTTGATTACGCTTGCGATTTTCAATGCATGTACAATTATCAGTAGGTTTACTAGGCTTGCAGAGGAATTATTTGGCACGCTAATTACTGTGCTTTTCTTTCAAGAGGCTATAGAGGGACTCATAAGTGAGTTCAAGATACCAAAGGATGCAAATCCCTTGTTAGAGGAATATCAATTCCATTGGCGGTATACAAATGGATTACTTTCAATCATTTTCTTTTTTGGGTTACTTTTCACTGCCATCCTAAGCAGAAGAGCAAGAAAATGGCGATATGGAACAGGGTGGATACGAGGTATCATTGCAGATTATGGAGTACCACTGATGGTAGTGTTTTGGACTGCACTATCTTATACCATACCAAGCAAAGTTCCATCTGGTGTTCCTAGAAGATTGTTTATTCCACTGCCTTGGGAACCTGCATCTCTCTACCACTGGACAGTAGTTAAGGATATGGGAAAGGTACCATTGCCATATATCTTTGGAGCAATTATTCCAGCAGTTATGATAGCAGGTTTATACTTTTTTGATCATAGTGTAGCTTCAAAGTTGGCTCAACAGAAGGAATTTAACCTTCAAAAACCCTCTTCTTACCACTATGATATTCTTCTTCTTGGAATAATGACTTTTATTTGCGGTATTCTTGGTCTTCCTCCAGCAAATGGAGTACTTCCTCAGTCCCCTATGCATACAAAGAGTTTAGCAATTCTTAGGAGGCAGATGATCCGAAAGAAGGTGGTGAAGAGTGCCAAGGAATGCATTAGGCAACAAGGAAGCAATTCTGAATTATACGGAACGATGCGGGCAGTGTTTATAGAAATGGATGCCGCACCTACCGTTAAAGAGTTGGAGTCTTTGAAAGAAGCTGTAATGAAAAATAATGAAAAGGGTGGTACAAAGGAAAAATTTGATCCTATTAAACATATAGATGCTTATTTGCCTGTTAGAGTTAATGAGCAAAGAATGAGCAACTTATTGCAGTCTCTACTTGTTGCTCTATCACTTTTAGCTATTTCTATTATCAAAAGGATACCTAGCTCAGTTCTTTGGGGATATTTTGCTTATATGGCAATTGATAGTCTTCATGGGAATCAATTCTGGGAAAGGTTACTGCTTCTCTTCATCACCCCAAAAAGGCACTACAAAATTTTGGAAGGCTCTCATGCCTCATTTTTTGAGTCAGTACCATGCCAGATAATAGCTGCCTTTACAAGTTTACAGTTTCTATATTTTGCAATTTGTTATGGTTTGACATGGATACCTATTGGTGGAATATTGTTTCCATTACCTTTCTTCCTTCTCATAACTATAAGAGAAAAATTGCTTCCAAGATTATTCAAGCCTAGCCATCTTCAGGAATTAGATGCTTCTGAGTATGAGGAAATAATTGGTGCTCCACTTGGACCCTATAATATACCACTACTGGAAAAAGATTCACTAGCTAGTTCTGATGACAGTCATGATACCTCAGAAGAAGATTATTATGATGCAGAGATATTGGATGAGATGACAACTTTTAGAGGGGAATTGAAATTTAGAACAGTTAACCAAAATGATAATAACCGAAGCTTAAACCGTAGCTTCACTTATGGCTTCAATGAAGACAGACATGTTCAGGTTTTCCCTGAATAA 2022 0.3773 MGPFNGITQDFKGRLEVYKQDWACAISTGFRIFAPTFYIFFCSALPVIAFGEQLYRDTDGTLSTVETLTSTAMCGIIHSIFGGQPLLILGVAEPTVIMYTILYSFCSKRPELGSKLFLAWAGWVCVWTSLMLITLAIFNACTIISRFTRLAEELFGTLITVLFFQEAIEGLISEFKIPKDANPLLEEYQFHWRYTNGLLSIIFFFGLLFTAILSRRARKWRYGTGWIRGIIADYGVPLMVVFWTALSYTIPSKVPSGVPRRLFIPLPWEPASLYHWTVVKDMGKVPLPYIFGAIIPAVMIAGLYFFDHSVASKLAQQKEFNLQKPSSYHYDILLLGIMTFICGILGLPPANGVLPQSPMHTKSLAILRRQMIRKKVVKSAKECIRQQGSNSELYGTMRAVFIEMDAAPTVKELESLKEAVMKNNEKGGTKEKFDPIKHIDAYLPVRVNEQRMSNLLQSLLVALSLLAISIIKRIPSSVLWGYFAYMAIDSLHGNQFWERLLLLFITPKRHYKILEGSHASFFESVPCQIIAAFTSLQFLYFAICYGLTWIPIGGILFPLPFFLLITIREKLLPRLFKPSHLQELDASEYEEIIGAPLGPYNIPLLEKDSLASSDDSHDTSEEDYYDAEILDEMTTFRGELKFRTVNQNDNNRSLNRSFTYGFNEDRHVQVFPE 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00718 673 PANTHER ANION EXCHANGE PROTEIN 3 592 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre1g00718 673 Pfam HCO3- transporter family 445 534 IPR011531 GO:0006820|GO:0016020
Trre1g00718 673 Pfam HCO3- transporter family 189 370 IPR011531 GO:0006820|GO:0016020
Trre1g00718 673 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016020
Trre1g00718 673 Gene3D Helical hairpin bin 14 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00718 Trre-Chr1 5404367 5408584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00718 3 673 Antiporters AT4G32510 63.877 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00718 K24194 - gmx:100787412 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00718 1 5404367 5408584 Trre1g00718 1 5404367 5408584 ECH
Trre5g05263 5 53644090 53649390 Trre1g00718 1 5404367 5408584 ECH
Trre1g00718 1 5404367 5408584 Trre5g05263 5 53644090 53649390 PCT