Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00714 ATGGATCTTTTTGATGATCATATTCTACTTGAAGCCCCTGCTGCCGAACGTGTGGACCAGGCTCTGCTGGATGATTATGAACTTGGTTCTCAACCAATGTCTATTAAGAAAATTCTTGCAGTTGCACATTATAAGGAGCGACAGGAGAAAAAGGAGGCAAAATATTCCACCAATCAAAGTGGTGGGGATTTCTTTCACGATGCTGGTGCTAATAATGAAGAGGAGACTTTTAGCTCAGATGATGATGGTTTTAGAGAAGAGGATGATCAAGCTAGGAAAAAGTTTACATCAACTGTCCCTTTATACAATAGTCATCCTTTCAAGGATAAGCCACCTAGGGTTAAATGGTCGAAACAAGATACCGAAAAGTTTTATGAGGCTCTGAAGGAGTTTGGCCTAGATTTTTCCATGATTCAACAAATTTTCCCTGATAAATCAAGACGTCAAATTCTGCTGAAGTTTAAGAATGAAGACCGACATCATCCTTTACAAATAACTGATGCTATTAATGGTCGTTCATCAGATCATCGTCTTTATAAGTTGGTGATTGCGAAACTGCCACAAATTTCTACCACTAATGCATATCAGGAAGCCATCGAAGACACTACTGAAGACATGTCACCTGGAATTAATGAAGAGATTGCAACAACTGAGCAGCAGGACATTGCTGATGTTAATAGTCCAGAGCAATCTGATGAAAGTGATGATGACTTACGGAAATGGTCTCAGTATCAAAGTATTATTTAG 747 0.3896 MDLFDDHILLEAPAAERVDQALLDDYELGSQPMSIKKILAVAHYKERQEKKEAKYSTNQSGGDFFHDAGANNEEETFSSDDDGFREEDDQARKKFTSTVPLYNSHPFKDKPPRVKWSKQDTEKFYEALKEFGLDFSMIQQIFPDKSRRQILLKFKNEDRHHPLQITDAINGRSSDHRLYKLVIAKLPQISTTNAYQEAIEDTTEDMSPGINEEIATTEQQDIADVNSPEQSDESDDDLRKWSQYQSII 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00714 248 MobiDBLite consensus disorder prediction 209 227 - -
Trre1g00714 248 Gene3D - 116 176 - -
Trre1g00714 248 SMART sant 112 160 IPR001005 -
Trre1g00714 248 CDD SANT 115 156 IPR001005 -
Trre1g00714 248 MobiDBLite consensus disorder prediction 204 248 - -
Trre1g00714 248 MobiDBLite consensus disorder prediction 51 89 - -
Trre1g00714 248 SUPERFAMILY Homeodomain-like 115 161 IPR009057 -
Trre1g00714 248 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 53 236 - -
Trre1g00714 248 Pfam Myb DNA-binding like 107 183 IPR039467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00714 Trre-Chr1 5380751 5388163 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre1g00714 Myb_DNA-bind_7 1.6e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00714 K15198 - gmx:100792788 192.586