Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00690 ATGGATACTACAACTTCAGATTCCGGAATGTCTAGAGAAGTCATGGCTTCTTCATCTGCTGCTGCTTTTGATTATGAGATCTTGGAAAAAGATTCTGACATCCCTAAAACTGCTGGACTTCCATCCAGCCGCACAAATCCGTGGATTGAACCTGAATCATTGAAACTTCAGCACCGAATTGGTCGAGGACCCTTTGGTGATGTTTGGCTTGCAACTCTTCATCAGTCAACTGAAGATTTTGATGAACACCATGAAGTTGCTGCTAAGGTGTTACATCCAATCAGAGAGGATCATGTGAAGATTGTACTTGAGAAATTCAATGAATTATACTTTAAGTGCCAAGGAATTTCTAGTGTTTCCTGGATACATGGAATTTCAATATTAAATGGAAGGATCTGCGTACTTATGAATTTGTACGAGGGTTCAATTGGTGACAAGATGGCTAGACACAAAGAGGGATGGATTTCACTACATGATGTCTTGAGGTATGGGATCAATCTGGCTCAAGGCATTCTGGAGCTTCACTCTAAAGGGATCCTCGTTCTCAACCTTAAACCATGTAATGTTCTTCTCAACAACAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCCAATCTTTTGTTTGGCTCCTCATTTGTTAGCTCAGATACTGCTCAGAGGCTTGGAACTCCTAATTACATGGCTCCAGAACAATGGAAACCAGAGGTTAGAGGCCCGATATCATTTGAAACGGATTCATGGGGATTTGGGTGCACTATTGTTGAAATGTTTACTGGTAATCAACCTTGGTATGGATGCTCTGTTGGTGGAATATACGGATCAGTTGTTGAAAAGCATGAAAAGCCGCATATCCCAAGTGGCCTTCCTTCCCCCATTGAGAATATCCTTAGTGGGTGTTTTGAGTATGATTTGAGGAATCGCCCTTTGATGATAGATATTCTGCGAGTCTTTAAAAGCTCACTGAAGGAACTGGCCAGTGATGGAGGATGGAGATATCAAGGAAATCTGAAAGTAATCCCAAAATCAGTCAGCACTGACTACACTAAATGGTTCCTCTCAAAGGATCATCTTCAGGTTGGCGACATGGTCCGATCCAGAAAGCCTCCCAACTCATGCAAAGCTCAAAATATGATTGTCCCAGAAGGAACTGTTGTCGGCCTTGAACGTACTGCAGATACCGGATTCGTTCTTGTGAGGGTCCACGGTATTCACGACCCTATAAGAATTCATGTGTCAACTCTTGAACGTGTCACAAATGGTTTGGCAGCTGGTGATTGGGTACGTGTGAAAGATAAGACTGAGAAACACTCACCAGTGGGCATTCTACATTCCATCAACCGCGATGACAGTAGAGCTGCTGTTGGATTAATCGGGTTGCAAACTCTATGGAATGGAAATTCTTCAGAACTCGAAATGGCAGAATCATTCTGTGTAGGCCAGTTTGTTAGGCCGAAAAAGAATGTTTTAAGCCCTCGATTCGAATGGCGTCGTAAAAGGTGCGGGACATCGGCTACCGGTAGGATTTCATGGATACTACCAAATGGGTGTCTGGTTGTCAAATTTCCAGGGTTGGTGACTTTTGGGAAGGAATCAAACACCTTTTTAGCTGATCCCTCTGAGGTTGAACTAGTTGATTTTAAGACTTGTCCTGGGATGATAGAAAAGTATCAACATGTTGAGGATCATCATTGGGCAGTTAGACCTGTTCTAGTTGCACTAAGCATATTTACAGCTTTGAAACTAGGCATATTAGTTGGAAGCAAAGTGAGAAGGTGCAAGAAGATCAAGGCAATAGTAAGCAAAAACAAACATGTTGAAGGTCAGAACACAAACAGTCCTACAAGGAGTACAAGTCATGGCAACACAACATGGGTTCCTTCAGTTGCTAATATCCTTTTTAAAGATGGTGCTTAA 1917 0.4225 MDTTTSDSGMSREVMASSSAAAFDYEILEKDSDIPKTAGLPSSRTNPWIEPESLKLQHRIGRGPFGDVWLATLHQSTEDFDEHHEVAAKVLHPIREDHVKIVLEKFNELYFKCQGISSVSWIHGISILNGRICVLMNLYEGSIGDKMARHKEGWISLHDVLRYGINLAQGILELHSKGILVLNLKPCNVLLNNNDQAILGDVGIPNLLFGSSFVSSDTAQRLGTPNYMAPEQWKPEVRGPISFETDSWGFGCTIVEMFTGNQPWYGCSVGGIYGSVVEKHEKPHIPSGLPSPIENILSGCFEYDLRNRPLMIDILRVFKSSLKELASDGGWRYQGNLKVIPKSVSTDYTKWFLSKDHLQVGDMVRSRKPPNSCKAQNMIVPEGTVVGLERTADTGFVLVRVHGIHDPIRIHVSTLERVTNGLAAGDWVRVKDKTEKHSPVGILHSINRDDSRAAVGLIGLQTLWNGNSSELEMAESFCVGQFVRPKKNVLSPRFEWRRKRCGTSATGRISWILPNGCLVVKFPGLVTFGKESNTFLADPSEVELVDFKTCPGMIEKYQHVEDHHWAVRPVLVALSIFTALKLGILVGSKVRRCKKIKAIVSKNKHVEGQNTNSPTRSTSHGNTTWVPSVANILFKDGA 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00690 638 Gene3D Transferase(Phosphotransferase) domain 1 140 344 - -
Trre1g00690 638 PANTHER OS06G0639500 PROTEIN 10 637 - -
Trre1g00690 638 Pfam Protein tyrosine and serine/threonine kinase 54 316 IPR001245 GO:0004672|GO:0006468
Trre1g00690 638 Gene3D Phosphorylase Kinase; domain 1 41 110 - -
Trre1g00690 638 ProSiteProfiles Protein kinase domain profile. 54 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00690 638 SUPERFAMILY Protein kinase-like (PK-like) 52 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00690 Trre-Chr1 5220072 5222695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00690 34 325 MAP Kinase Kinase Kinase AT2G17700 25.000 2.25e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Trre1g00690 PK_Tyr_Ser-Thr 4.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00690 - - gsj:114393396 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00690 1 5220072 5222695 Trre1g00690 1 5220072 5222695 ECH