Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00661 ATGGAAGTTCCTGATGAGAATGGGAAGCATACCGTTGATGAGAATGAAGAGGAAAATCTCAATGATACCGCTGAAGAGGAAGTCCCTGATGAGAATGGGAAGCATACGGCTGACAATGATTCATGTCATGTTGATTTAGAAGCTAATGTTAGTCAAGAACCATACATTGGAATGAAATTTGATTCACAAGAAAATGCTTATTCATTTTATACACATTATGCTAAGTGTGTCGGATTTGGGATATCAATTAAAAACAGTCGCCGCTCAAAGGTTTCTAGAGAGTTTATTGACGCGATTTATGCTTGCACAAGATACGGGAAGAAGCGAGAATCCACAGCACAAAATCCGCGTCCATGTTTGAAGGTGGAATGTGAGGCCAGCTTACGAATTAAAAGAAATTGTGAAGGAAAGTGGATTGTTCATAGCTTCATTAAAGACCACAATCATGAGCTTTTTCCAGCATATGCTCATTATTTTCCTTGCCATAGAGGAATCAATAAAGCTCAGAAGCATGCTATTGAAACTTTGCAACATGCTATTGAATTGCTCGAGGAAGGATCACTAAGCTTTGAGAGTTACGATGTTGCATTCCATGCACTTGAAGAGACCTTGAAACAATGTGCAGCTATCAATAAATCTTTGAAACTCAGTAAGGAAAAAGTTGGTCAAAACAGTTTCCATGAGAAGTCACTACGTGATCCTCAACCATCAAAAACAAAAGGGGCTCCTACAAAAAGAATGAAGAGTGGGATTGAAAAAGGTCGTAAGAGAACATCTAGTGTTAAAGTAAAAAAAGTTTGA 801 0.382 MEVPDENGKHTVDENEEENLNDTAEEEVPDENGKHTADNDSCHVDLEANVSQEPYIGMKFDSQENAYSFYTHYAKCVGFGISIKNSRRSKVSREFIDAIYACTRYGKKRESTAQNPRPCLKVECEASLRIKRNCEGKWIVHSFIKDHNHELFPAYAHYFPCHRGINKAQKHAIETLQHAIELLEEGSLSFESYDVAFHALEETLKQCAAINKSLKLSKEKVGQNSFHEKSLRDPQPSKTKGAPTKRMKSGIEKGRKRTSSVKVKKV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00661 266 MobiDBLite consensus disorder prediction 221 266 - -
Trre1g00661 266 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 225 - -
Trre1g00661 266 MobiDBLite consensus disorder prediction 1 17 - -
Trre1g00661 266 MobiDBLite consensus disorder prediction 27 41 - -
Trre1g00661 266 Pfam FAR1 DNA-binding domain 68 153 IPR004330 -
Trre1g00661 266 MobiDBLite consensus disorder prediction 1 41 - -
Trre1g00661 266 MobiDBLite consensus disorder prediction 221 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00661 Trre-Chr1 4985885 4988135 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre1g00661 FAR1 4.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00661 - - mtr:120578282 279.256