Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00616 ATGGCTGTTTCATCTTCATCATCTCTTTTGCTCCTTTTTCTTGTTTTTGGTTTTGCTGCTGCAGCAGCACCTAGGGATATCTATCTTAAGAAAGATGCTTGGAAAATTCCAACTTCTGAATCTGATTCACTCAACAAATGGGCTCAAACTGTTCGCATCCAAATTGGAGACCATCTAATTTTGAAATATGAAGCTGGAAAAGACTCAGTTTTGCAAGTTACCAAAGAGGATTATTTGAGCTGCAACATCTCAAACCCAATCAAATACTACAATGATGGAAACACTAAATTTAGATTTGATCATTCTGGTCCATACTACTTCATCAGTGGAGAAAATGGTCACTGTGAAAAGGGTCAGAAGCTTACTATAGTGGTTATGAGTCAAAGGGGAAAGAGTCCTACTCCTGCTGCTCCTACTGCTATTTCACCTGCACCTTCACCAACTGAGGTTGAAGGTCCTGGTCCTGCTGTTGCTCCAGCTCCAACTAGTACTGCAACTGTTTTGCAAGGTGGTGGTGTTTTTGTTGCTATGGGAGTGATTGCTGCTATGTGGCTTTTCTGA 561 0.4118 MAVSSSSSLLLLFLVFGFAAAAAPRDIYLKKDAWKIPTSESDSLNKWAQTVRIQIGDHLILKYEAGKDSVLQVTKEDYLSCNISNPIKYYNDGNTKFRFDHSGPYYFISGENGHCEKGQKLTIVVMSQRGKSPTPAAPTAISPAPSPTEVEGPGPAVAPAPTSTATVLQGGGVFVAMGVIAAMWLF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00616 186 CDD OsENODL1_like 31 126 IPR041846 -
Trre1g00616 186 FunFam Early nodulin-like protein 1 29 130 - -
Trre1g00616 186 Pfam Plastocyanin-like domain 34 119 IPR003245 GO:0009055
Trre1g00616 186 Gene3D - 30 137 IPR008972 -
Trre1g00616 186 MobiDBLite consensus disorder prediction 130 156 - -
Trre1g00616 186 MobiDBLite consensus disorder prediction 138 154 - -
Trre1g00616 186 PANTHER BLUE COPPER PROTEIN 31 138 IPR039391 GO:0009055
Trre1g00616 186 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
Trre1g00616 186 ProSiteProfiles Phytocyanin domain profile. 25 127 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00616 Trre-Chr1 4707430 4708656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00616 14 183 Phytocyanin Superfamily AT2G25060 51.462 7.48e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00616 - - gmx:100527857 194.897