Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00614 ATGGCGGGGAGGCACTGTTACAAGGATGTGATTCCATTCACAGTAATGGTTGCAATGGAGTGCTCTAACGTTGGTGTCAGTGTTCTATTCAAAGCAGCTACTGAAAAGGGATTGAGTTACTATGTCTTCATCGCTTATTCATATGTTGTCTCCACTCTTGTTCTACTTTTGCCTCTCCCCTTCTTCGTCTTCAAATGGTCAAGAGGGCTTCCTCCTTTGGATGTGTCTATAATCTTCAGAATTTTTCTCCTTGGAGTTTTGGGAGTTGTAGCTCAGCTTTTTGGATATAAAGGACTTCAATACACTACGCCTACTCTTTATTCTGCTCTTTCAAACCTTATACCTGCTTTTACATTCATCCTTGCTATCTTTTTCAGGATGGAGAAGGTAAATATAAGATCCAAAAGCACTCAAGCAAAAATATTGGGTTCTACAATATCAATATTAGGTGCACTCATAGTTGTTCTTTATAAGGGTCCTACAATCATACCCTCATCAATACAACCATTACCACCACCTATTATTAATTCTCCAATAAGCTCAACATCAGAATCAAATTGGGTTCTTGGTGGATCTCTACTAGTTATTGAGTATCTTATTATTCCAATTTGGTACATTATTCAGACTAATGTTATAAAACAATATCCATCAGAGATTATTGTGGTCTTTTTATACAACCTATGTGGAACACTAGTGTCTTTACCACTATGCTTACTACTTGAATCAAATTTGAGTGCTTGGAAGATAAATCATGATATAACATTGTTCTCCATTTTATACTCGGGAATATTTTGCACAGGACTAAGTTCTCTTGTTCACACTTGGGGACTCCATGTTAAAGGACCAGTATATATATCACTCTTTAAGCCGTTGTCAATAGCTATTGCGGCATCTTTTAGCGCTATATTCCTCGGCGATCCCCTATATTTTGGAACTGTAGTTGGAGCAGTAATAATATCAATTGGATTTTATGCTGTTTTATGGGGGAAATCCAAAGAAGAATCAAATGAAGATTTTGTCATAGTTAGAGCTTCACTTCCATCCAATACTAACAAAACTCCTTTGTTGAAAGACTCAAATGTGATAGATAGAGGGATCACACATAATGATTCTTGA 1116 0.3665 MAGRHCYKDVIPFTVMVAMECSNVGVSVLFKAATEKGLSYYVFIAYSYVVSTLVLLLPLPFFVFKWSRGLPPLDVSIIFRIFLLGVLGVVAQLFGYKGLQYTTPTLYSALSNLIPAFTFILAIFFRMEKVNIRSKSTQAKILGSTISILGALIVVLYKGPTIIPSSIQPLPPPIINSPISSTSESNWVLGGSLLVIEYLIIPIWYIIQTNVIKQYPSEIIVVFLYNLCGTLVSLPLCLLLESNLSAWKINHDITLFSILYSGIFCTGLSSLVHTWGLHVKGPVYISLFKPLSIAIAASFSAIFLGDPLYFGTVVGAVIISIGFYAVLWGKSKEESNEDFVIVRASLPSNTNKTPLLKDSNVIDRGITHNDS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00614 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 332 - -
Trre1g00614 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 158 - -
Trre1g00614 371 Pfam EamA-like transporter family 27 155 IPR000620 GO:0016020
Trre1g00614 371 Pfam EamA-like transporter family 198 327 IPR000620 GO:0016020
Trre1g00614 371 PANTHER WAT1-RELATED PROTEIN 12 337 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00614 Trre-Chr1 4699499 4702925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00614 1 365 Nodulin-like Gene Family AT5G40240 51.499 1.67e-129 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00614 - - gmx:100805667 466.848