Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre1g00586 | ATGGCATTTCTACCTCAGGTTAATTCTGCTGATGATTCACCTGTTAGTGGTGGAGGACTCAGTCAGAATGGAAAATTCAGCTATGGATATGCTAGCTCCCCTGGGAAAAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCGTTGATGGTGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGGTCACGGCGGTGCTCGTGCTGCTGAGTATGTCAAACAAAACCTATTTAGTAATTTGATCAGCCATCCAAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCGTATACGCATACCGACTCTGAATTTCTGAAATCAGAAAATAATCAAAACAGAGATGCTGGATCTACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGATTCCCGAGCTGTTATATGCAGAGGCGGAAACGCAATTGCTGTGTCCCGAGATCATAAACCAGATCAAACCGATGAAAGACAAAGGATAGAAGATGCAGGAGGATTTGTTATGTGGGCTGGTACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGCGCATTTGGTGATAGACTCCTTAAGCAATACGTTGTTGCTGATCCGGAAATCCAGGAAGAAAAGGTTGATAGCTCTCTCGAGTTTCTTATATTAGCCAGTGACGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGATTAAACCGATTGAGGACGCAGAGGAAGCAGCTAAGAGGCTGATGAAAGAAGCATATCAGAGAGGTAGTTCTGACAACATTACTTGTGTCGTCGTTCGTTTCATATTGAACAACCAAGCATGGGAGCACACTCACCAAGTTGGGACTTGTACACGTGACAAGGTTCCTAATACCGATTATGAAACCGCTTGTCCTTTCCGTTATCCCAAAGATGTTACTGCAACCGATCATGCAACTGATTCCAATTCTGAGACTATCAATGTTACTGCAATTGATTCTGGAAATTCTGATGTTGCTACTGCTGAAGCCGACGACGAACATTTCCGACCTACCTTCGGATCCTTTGAAAGAGATTGA | 1074 | 0.4339 | MAFLPQVNSADDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMKEAYQRGSSDNITCVVVRFILNNQAWEHTHQVGTCTRDKVPNTDYETACPFRYPKDVTATDHATDSNSETINVTAIDSGNSDVATAEADDEHFRPTFGSFERD | 357 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre1g00586 | 357 | SUPERFAMILY | PP2C-like | 21 | 273 | IPR036457 | - | |
Trre1g00586 | 357 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Trre1g00586 | 357 | PANTHER | PROTEIN PHOSPHATASE | 25 | 272 | IPR015655 | GO:0004722|GO:0006470 | |
Trre1g00586 | 357 | ProSitePatterns | PPM-type phosphatase domain signature. | 58 | 66 | IPR000222 | GO:0043169 | |
Trre1g00586 | 357 | Gene3D | - | 19 | 278 | IPR036457 | - | |
Trre1g00586 | 357 | MobiDBLite | consensus disorder prediction | 339 | 357 | - | - | |
Trre1g00586 | 357 | CDD | PP2Cc | 26 | 273 | IPR001932 | - | |
Trre1g00586 | 357 | Pfam | Protein phosphatase 2C | 55 | 266 | IPR001932 | - | |
Trre1g00586 | 357 | SMART | PP2C_SIG_2 | 22 | 273 | IPR001932 | - | |
Trre1g00586 | 357 | SMART | PP2C_4 | 17 | 271 | IPR001932 | - | |
Trre1g00586 | 357 | MobiDBLite | consensus disorder prediction | 332 | 357 | - | - | |
Trre1g00586 | 357 | FunFam | probable protein phosphatase 2C 59 | 19 | 277 | - | - | |
Trre1g00586 | 357 | ProSiteProfiles | PPM-type phosphatase domain profile. | 27 | 273 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre1g00586 | Trre-Chr1 | 4458283 | 4467025 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre1g00586 | 6 | 274 | PP2C-type Phosphatase Gene Family | AT4G31750 | 92.937 | 0.0 | 510 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre1g00586 | K17506 | - | gmx:547661 | 526.168 |