Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00586 ATGGCATTTCTACCTCAGGTTAATTCTGCTGATGATTCACCTGTTAGTGGTGGAGGACTCAGTCAGAATGGAAAATTCAGCTATGGATATGCTAGCTCCCCTGGGAAAAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCGTTGATGGTGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGGTCACGGCGGTGCTCGTGCTGCTGAGTATGTCAAACAAAACCTATTTAGTAATTTGATCAGCCATCCAAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCGTATACGCATACCGACTCTGAATTTCTGAAATCAGAAAATAATCAAAACAGAGATGCTGGATCTACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGATTCCCGAGCTGTTATATGCAGAGGCGGAAACGCAATTGCTGTGTCCCGAGATCATAAACCAGATCAAACCGATGAAAGACAAAGGATAGAAGATGCAGGAGGATTTGTTATGTGGGCTGGTACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGCGCATTTGGTGATAGACTCCTTAAGCAATACGTTGTTGCTGATCCGGAAATCCAGGAAGAAAAGGTTGATAGCTCTCTCGAGTTTCTTATATTAGCCAGTGACGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGATTAAACCGATTGAGGACGCAGAGGAAGCAGCTAAGAGGCTGATGAAAGAAGCATATCAGAGAGGTAGTTCTGACAACATTACTTGTGTCGTCGTTCGTTTCATATTGAACAACCAAGCATGGGAGCACACTCACCAAGTTGGGACTTGTACACGTGACAAGGTTCCTAATACCGATTATGAAACCGCTTGTCCTTTCCGTTATCCCAAAGATGTTACTGCAACCGATCATGCAACTGATTCCAATTCTGAGACTATCAATGTTACTGCAATTGATTCTGGAAATTCTGATGTTGCTACTGCTGAAGCCGACGACGAACATTTCCGACCTACCTTCGGATCCTTTGAAAGAGATTGA 1074 0.4339 MAFLPQVNSADDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMKEAYQRGSSDNITCVVVRFILNNQAWEHTHQVGTCTRDKVPNTDYETACPFRYPKDVTATDHATDSNSETINVTAIDSGNSDVATAEADDEHFRPTFGSFERD 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00586 357 SUPERFAMILY PP2C-like 21 273 IPR036457 -
Trre1g00586 357 MobiDBLite consensus disorder prediction 1 20 - -
Trre1g00586 357 PANTHER PROTEIN PHOSPHATASE 25 272 IPR015655 GO:0004722|GO:0006470
Trre1g00586 357 ProSitePatterns PPM-type phosphatase domain signature. 58 66 IPR000222 GO:0043169
Trre1g00586 357 Gene3D - 19 278 IPR036457 -
Trre1g00586 357 MobiDBLite consensus disorder prediction 339 357 - -
Trre1g00586 357 CDD PP2Cc 26 273 IPR001932 -
Trre1g00586 357 Pfam Protein phosphatase 2C 55 266 IPR001932 -
Trre1g00586 357 SMART PP2C_SIG_2 22 273 IPR001932 -
Trre1g00586 357 SMART PP2C_4 17 271 IPR001932 -
Trre1g00586 357 MobiDBLite consensus disorder prediction 332 357 - -
Trre1g00586 357 FunFam probable protein phosphatase 2C 59 19 277 - -
Trre1g00586 357 ProSiteProfiles PPM-type phosphatase domain profile. 27 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00586 Trre-Chr1 4458283 4467025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00586 6 274 PP2C-type Phosphatase Gene Family AT4G31750 92.937 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00586 K17506 - gmx:547661 526.168