Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00566 ATGATGCACATGACACTATATTGGGGAAAAAACGTGACACTGTTATTTGATTCATGGAAGACCGATTCATGGACGAGTTATATACTGAGTTTAATCGCGTGTTTCTTGATTGCTACTTTCTACCAATATCTAGAGAATATTCGGATTCGGCTGAAGTTTTTTTCCGGCGAGGGGAGGGGTGGTTCTACGGCGCCGGAGATTCAGACTCCTCTTCTGCAGTTGAATAAGGTGTCTAGAAATAAGGTTGTGGAATCGGTTTTGTTTGGGGTTAATTCTGCTATTGGGTATTTGTTGATGTTGGCTATAATGTCTTTTAATGGTGGTGTTTTTGTGGCTATTGTGGTTGGTTTAACAATTGGTTATTTCTTCTTTAGGAGTCAGGGTGAAGAAGATTCTGCAATTGTTGTTGATAGTTCTTGTGCATGTGCTTAG 432 0.4005 MMHMTLYWGKNVTLLFDSWKTDSWTSYILSLIACFLIATFYQYLENIRIRLKFFSGEGRGGSTAPEIQTPLLQLNKVSRNKVVESVLFGVNSAIGYLLMLAIMSFNGGVFVAIVVGLTIGYFFFRSQGEEDSAIVVDSSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00566 143 Pfam Ctr copper transporter family 4 124 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre1g00566 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 130 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00566 Trre-Chr1 4282601 4283032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00566 1 143 Inorganic Solute Cotransporters AT5G20650 56.757 2.69e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00566 K14686 - gmx:100795071 204.912