Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00509 ATGGCAGAAACTGCAGTATGGTTTGTTCTTAAACAAGTATACCAACTACTAAAAGAAGAAGCAAAATTATTGAAACATGTGCGAAAAGACTTTGAAGATATTAAAAACGAACTAGAGTTTATCCGCGCCTTCTTAAAAGACGCGGATAAAAGAGCCACAACAGAAGAATTAGGAATCAAACTTTGGGTCAAACAGTTGAGAGAATTATCTTTTCATATAGAAGATGTCATTGATGCATACATCATGGATGTAAATGCAACATATCATCATGATCATGGATACACAGGGAAATTCCAAAGTGTTATTGGATCGATGAAATTGAAAACCCTAACCCTAAAACCTCGTCATCGAATAGCAAGTGAGATTAAAGAGATCAAATTGAGGATTTATGGAATCAAAGAAAGAATTGAAAGATACAATTTTCAGTTCTCTGAACAACAACAAGGATTGTCGATTAAGTATCCTGATCGATTGGGTTCGCTTTTCGTTGATGAAGGTGAAATTGTGGGGTTTGAGAAACCTAGAGATGAAATTGTTGGTTGGTTGGTTGGTTTGGATGGAGAAGAAAGAAGTCGGAGTGTGATTTCGGTTGTTGGAATGGGGGGACTAGGGAAAACAACTCTTGCTAAAAATGTTTATGATGATCAACGAGTGAAAGGTTACTTTGATTGTCGCGCATTTCTTGTGGTTTCTCAATCATATAGTGTTGAAGCTTTGGTGAGAAATATGATGATGCAGTTTTCTGAAGAAACTAAAGAGCCTCTTCCTCAAGGTATAAACATGATGGACAAGACGGCACTCATAACTGTTGCAAGGTCTTACTTGCAGAGCAAGAGATATGTGATTTACTTTGATGATGTATGGAAAGTAGACTTTTGGGACGAGATCCAACTTGCCGCACCAGATAACAAGAAAGGAAGTAGGATAGTGATCACAACCAGGAATTTGGATGTTGCCAACTATTGTAAGAAAGATTCTCGTGTTCAAGTGCACAAGTTGCAACCCTTGCCTCCAAACAAAGCATGTGAACTCTTTTGCAACAAGGCATTTCGATTTGATTTCGATGGAAGCTGTCCATTTGAGCTGAAAGATATATCCGATGAAATCGTTCAAAAATGCGAAGGGTTGCCGCTTGCAATTGTGGCTATAGGAGGTCTCTTGTCAACTAAAGATAAAACTGTTTCTGAGTGGAAAAAACTATGCCAAAATCTAAGTTTGGAATTAGACCGTAATCCACATTTAGCTAATCTAACAAGAATTTTAGGCATGAGTTATGATGACTTGCCGCATTATTTGAAATCATGCATCTTATATTTTGGTATATACCCAGAAGATTACTCAATTAGGAGTTCAAGGTTGATTCGACAATGGATAGCAGAGGGTTTTGTTAAACATGAAGTGGGAAAATCTTTGGAGGAAGTTGGAGAAGAATATTTGACTGAGTTGATCCACAGAAGTTTGGTTCATGTCTCCCGTGTTCACTATGATGGTAAAGCTACAAGCTGCCGAATCCACGATCTGTTACGAGAAATGATCATGAGAAAAATGAAAGATTTAAGCTTTTGTCATGTTGTGGATGAAGATGATCATGAACAAATCTCTGATGTAATGATTAGGAGATTGGCTATAAAAACCAGTTCCAACAACATGCTAAAGAGCATTGAAAACTTTCCCCTACGTTCCCTATATACATTCGATGTTTTAATAAAATTTTCCGATTACTTTGGGAGTAAATTCTTTGCAAAGTCTAAACTTTTGAAAGTATTGGATTTGGAAGGTGCTTTGTTGGACTATGTTCCTAATGATATTGGAAGTATGTTTCACTTAAAGTACTTGAGCTTAAGATATACAAATGTCAAGAATCTTGGATTTAAGAAGTTGAACAAATTATTTCTTGTGCAGTTGAATAACTTGAATTCCATTTTAATAGATAATGAAGCTCTTCCTGCTCTTAAACTGATTGAAATGGCGTACCTCCCCAAGCTAAAAGAGATTCCTTCTGAACTATATTGCCTACCAGCATCCGCTACTAGTACGGGAAAAACATGGTCACTCTACTCTACCAATTGCATTAGGAAGAATTTGGCTGCTGAGACAAAACCTTCACAATCAATAACAGATACCATTTAA 2130 0.3676 MAETAVWFVLKQVYQLLKEEAKLLKHVRKDFEDIKNELEFIRAFLKDADKRATTEELGIKLWVKQLRELSFHIEDVIDAYIMDVNATYHHDHGYTGKFQSVIGSMKLKTLTLKPRHRIASEIKEIKLRIYGIKERIERYNFQFSEQQQGLSIKYPDRLGSLFVDEGEIVGFEKPRDEIVGWLVGLDGEERSRSVISVVGMGGLGKTTLAKNVYDDQRVKGYFDCRAFLVVSQSYSVEALVRNMMMQFSEETKEPLPQGINMMDKTALITVARSYLQSKRYVIYFDDVWKVDFWDEIQLAAPDNKKGSRIVITTRNLDVANYCKKDSRVQVHKLQPLPPNKACELFCNKAFRFDFDGSCPFELKDISDEIVQKCEGLPLAIVAIGGLLSTKDKTVSEWKKLCQNLSLELDRNPHLANLTRILGMSYDDLPHYLKSCILYFGIYPEDYSIRSSRLIRQWIAEGFVKHEVGKSLEEVGEEYLTELIHRSLVHVSRVHYDGKATSCRIHDLLREMIMRKMKDLSFCHVVDEDDHEQISDVMIRRLAIKTSSNNMLKSIENFPLRSLYTFDVLIKFSDYFGSKFFAKSKLLKVLDLEGALLDYVPNDIGSMFHLKYLSLRYTNVKNLGFKKLNKLFLVQLNNLNSILIDNEALPALKLIEMAYLPKLKEIPSELYCLPASATSTGKTWSLYSTNCIRKNLAAETKPSQSITDTI 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00509 709 Pfam Rx N-terminal domain 6 85 IPR041118 -
Trre1g00509 709 Gene3D Ribonuclease Inhibitor 513 683 IPR032675 -
Trre1g00509 709 Gene3D - 4 119 - -
Trre1g00509 709 Coils Coil 17 37 - -
Trre1g00509 709 Gene3D - 336 424 IPR042197 -
Trre1g00509 709 SUPERFAMILY RNI-like 557 672 - -
Trre1g00509 709 CDD RX-CC_like 2 134 IPR038005 -
Trre1g00509 709 Gene3D - 425 512 IPR036388 -
Trre1g00509 709 Gene3D - 162 330 IPR027417 -
Trre1g00509 709 PANTHER DISEASE RESISTANCE PROTEIN RP 33 663 IPR044974 GO:0006952
Trre1g00509 709 FunFam Probable disease resistance protein At1g63360 425 514 - -
Trre1g00509 709 FunFam Probable disease resistance protein At1g61300 159 327 - -
Trre1g00509 709 PRINTS Disease resistance protein signature 274 288 - -
Trre1g00509 709 PRINTS Disease resistance protein signature 373 387 - -
Trre1g00509 709 PRINTS Disease resistance protein signature 194 209 - -
Trre1g00509 709 PRINTS Disease resistance protein signature 625 641 - -
Trre1g00509 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 439 IPR027417 -
Trre1g00509 709 Pfam NB-ARC domain 174 427 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00509 Trre-Chr1 3806074 3808847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00509 195 392 WRKY Transcription Factor Family AT5G45050 24.752 7.05e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00509 K13457 - gmx:100801561 664.84