Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00446 ATGTCCCTACCTTTTACAGATCGGAACCGTCGTCGCAACGCAAAACCACATCAAAATCCAGTTCCCGATGCAAAACGCGATGACGTAGAAGGTGGATTCGACGGTTCATCATTCACCGGTGCCGTATTCAACCTCTCAACTACAATTATGGGTGCCGGAATCATGGCTCTTCCTGCTGCCGTCAAACAACTCGGATTGATTCCTGGCTCAATCATGATTATACTCTGTGCCATTTTAACTGAATCATCCATTGTTACTCTCTTGAAATTCACACGTGTGTCTAAAACGTCGACGTATTCTGGTGTTGTGAGGGATGCTTTTGGTGGCATTGGTCGATTTGTTTTGTTGCTTTGTATCATCTTCAACAATATGGGAATGCTTATTGCCTACATGGTCATTATCGGTGATGTGTTCTCGGGAACATGGTCGGAAGGAGTCCACTATTCAGGAGTTCTAGAAGAATGGTTTGGTCAGCGTTGGTGGTCAACGCGTCCTATCTTGTTGTTGCTCACAACGCTTTTTGTTTTTGTGCCTCTCACATCCTTCAGACGTGTAGATTCACTGAGATACACATCAGCATTATCAGTGGGATTGGCTATTGTTTTTGTGGTGATAACAGCTGGTGTTGCAATTGTTAAGTTTGTCGATGGAAGCATTGGGGTGCCACACTTAATGCCCAAAGTCACTAGCCAAGAATCCTTTTGGAAACTCTTCACTACCGTCCCTATTTTAGTCACTGCTTACATCTGTCATCATAATGTGCACCCTATAGAGAATGAACTTAAAGATCCATCCCATATGAACGCAATAGTTCGGACATCACTTTTACTATGCGCGTCCGTGTACATAGCGACAAGTCTTTTTGGAATTTTATTATTTGGAGACAAAATACAAGATGATGTACTTGCAAATTTTGATGGAGATCTTGGAGTTCCTTATGGTACATTTCTTAATGATGTAGTTAGAGTGAGTTATGGAATTCACCTAATCTTAGTGTTTCCAATTGTGTTTTTCTCCCTTAGACTCAACCTAGATGGTCTTTTGTTTCCACATGCCATTCCTCTTGCCTTTGACAACAAGAGATTTTGTTTTGTGACAATAATTCTCATGGCTTTTGTTTTTGTTGGAGCTAATTATGTTCCTAGTATTTGGTATGCCTTTCAATTCACAGGTGCTACAACTACCATTTCTGTTGGTTACATTTTTCCAGCTGCCATTGCTCTTAAGGACAATCGTGGGGTTGCAACAAAAAAAGACAAGTTGTTATCTTTGTTAGTTATACTTTTGGCTGTTTCATGTAGCACTATAGCCATCTTTAGTGACTTGTATTATAGCACTTTCAGTAATGAAACAACATCACATGAAGCTTAA 1371 0.4048 MSLPFTDRNRRRNAKPHQNPVPDAKRDDVEGGFDGSSFTGAVFNLSTTIMGAGIMALPAAVKQLGLIPGSIMIILCAILTESSIVTLLKFTRVSKTSTYSGVVRDAFGGIGRFVLLLCIIFNNMGMLIAYMVIIGDVFSGTWSEGVHYSGVLEEWFGQRWWSTRPILLLLTTLFVFVPLTSFRRVDSLRYTSALSVGLAIVFVVITAGVAIVKFVDGSIGVPHLMPKVTSQESFWKLFTTVPILVTAYICHHNVHPIENELKDPSHMNAIVRTSLLLCASVYIATSLFGILLFGDKIQDDVLANFDGDLGVPYGTFLNDVVRVSYGIHLILVFPIVFFSLRLNLDGLLFPHAIPLAFDNKRFCFVTIILMAFVFVGANYVPSIWYAFQFTGATTTISVGYIFPAAIALKDNRGVATKKDKLLSLLVILLAVSCSTIAIFSDLYYSTFSNETTSHEA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00446 456 MobiDBLite consensus disorder prediction 8 28 - -
Trre1g00446 456 Pfam Transmembrane amino acid transporter protein 35 435 IPR013057 -
Trre1g00446 456 MobiDBLite consensus disorder prediction 1 28 - -
Trre1g00446 456 PANTHER AMINO ACID TRANSPORTER 31 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00446 Trre-Chr1 3307022 3310891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00446 11 443 Amino Acid or Auxin Permease AAAP Family AT3G30390 54.897 1.24e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00446 K14207 - gmx:100814034 678.707