Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00389 ATGCCAGAAACATTCACCGATAATGATCACTTTAACTGGTTTGACACATCGCTAAAATCAGTATCCGAAACAGCAGAGATTCTCTACACTTATAAACACATAGCTCATGGATTCTCAACCAGATTAACAAACCAAGAAGCTGAAACACTTCTAAAACAACCAGGAATTCTCTCTGTTACCCCTGAACTCAGATACCAACTTCACACAACAAGAACACCAGAGTTTCTCGGATTACCGAAAACAAACACTTTGTTACCGAATTCAAATCAACAGAGTGATGTTATTATTGGTGTTCTTGACACTGGTATATGGCCAGAGCTAAAAAGCTTAGATGACACAGGACTTGGTCCAATACCAACTAGTTGGAAAGGCGAATGCGAAACCGGTAACAATCTCAATTCATCAAATTGCAACAGAAAACTGATTGGTGCAAGGTTTTTCTCAAAAGGGTATGAAGCAGCACTTGGTCCTATTGATGAAACAACAGAATCAAGATCAGCTAGAGATGATGATGGACATGGAAGTCATACCTTAACAACAGCAGGTGGTTCTGAAGTAGCAGAAGCTAGCTTATTTGGTTTAGCTTCTGGTACTGCTAGAGGCATGGCTACACAAGCGCGTGTCGCGGCATACAAAGTGTGTTGGCTTGGTGGCTGTTTGACTTCAGATATAGCTGCAGGAATCGATAAAGCTATTGAAGACGGTGTTAACATCTTATCGATGTCAATTGGTGGTAGCCAAACAGAATACTATAGAGACATCATTGCAATTGGTTCTTTCACAGCAATGTCTCATGGAATTCTAGTTTCTGCTTCAGCAGGAAATGGTGGACCGAGTGCTGATACCTTATCGAATGTAGCACCGTGGATAACAACGGTCGGAGCAGGAACAATTGATCGCGATTTTCCATCTTATATATCACTTGGAAATGGAAATAATTACACTGGTGCATCACTTTACAATGGAAAACCTTTACCTGATTCATTGCTACCACTTATTTATGCAGGTAATGCTACAAATTCCTCAGTTGGGTATCTTTGTATACCTGATTCATTAATAAGTTCAAAAGTTTCCGGCAAAATTGTGATATGTGAAAGAGGTGGAAACTCAAGAACTGAGAAGGGTCTAGTAGTAAAAACTGCTAGTGGAATTGGAATGATTTTGGTTAACAATGAAGAATATGGTGAAGAGTTAATTGCTGACCCTCATCTTCTTCCAGCAGCAACATTGGGTCAAAAATCAGGCACAATTCTAAAAGACTATGTTTTTGCTACGAAAAATCCAACAGCTAAAATTGTTTTTGGTGGCACACACTTGCAAGTTCAACCTTCACCAGTGGTAGCAGCATTCAGTTCAAGAGGACCAAACGCTTTAACACCAAAGATTCTTAAACCGGATTTAATAGCTCCAGGAACTTCAATGTCGTGTCCTCACGTGAGTGGTTTAGCTGCAATAGTTAAAGGAGCTCACCCTGAATGGAGTCCTGCTTCTGTACGGTCAGCACTAATGACCACCGCATACACCTCATACAAAACCGGACAAACAATCCAAGATGTTACAACTGGGAAACCGGCTACTCCCTTTGATTTTGGATCGGGACACGTGGATCCTGTATCCGCCCTTGATCCTGGTCTTGTTTATGATCTCAACGTCGATGATTATCTTGGTTTTTTTTGTGCTTTAAACTACACGTCATTTCAAATCAAAATTGCTGCTAGAAGAGATTTCACGTGTACCAAGAAATATAGGCTTGAAGATTTTAATTATCCTTCTTTTGCTGTTGCTTTGGAAACTGCTTCGGGAATTGGTGGTGGTTCGAATAAACCGGTAACAATTGAATATAATAGGGTTCTTACAAATGTTGGAACTCCGGGAACATATAAAGCTTCTGTTGTGATGGAATCTTCGTCTGTGAAGGCTGTGGTTGAACCAGAGATTATTACTTTTAAGGAAGTGAATGAGAAGAAGGGTTATACGGTCCGGTTTATTTGTGATTCGATGCCTTCCGGAACGAAGGAATTTGGTTATTTGGAATGGAATGATGGGAAGCATAGGGTTAAAAGTCCAATTGCTTTTAGTTGGACTTGA 2088 0.4028 MPETFTDNDHFNWFDTSLKSVSETAEILYTYKHIAHGFSTRLTNQEAETLLKQPGILSVTPELRYQLHTTRTPEFLGLPKTNTLLPNSNQQSDVIIGVLDTGIWPELKSLDDTGLGPIPTSWKGECETGNNLNSSNCNRKLIGARFFSKGYEAALGPIDETTESRSARDDDGHGSHTLTTAGGSEVAEASLFGLASGTARGMATQARVAAYKVCWLGGCLTSDIAAGIDKAIEDGVNILSMSIGGSQTEYYRDIIAIGSFTAMSHGILVSASAGNGGPSADTLSNVAPWITTVGAGTIDRDFPSYISLGNGNNYTGASLYNGKPLPDSLLPLIYAGNATNSSVGYLCIPDSLISSKVSGKIVICERGGNSRTEKGLVVKTASGIGMILVNNEEYGEELIADPHLLPAATLGQKSGTILKDYVFATKNPTAKIVFGGTHLQVQPSPVVAAFSSRGPNALTPKILKPDLIAPGTSMSCPHVSGLAAIVKGAHPEWSPASVRSALMTTAYTSYKTGQTIQDVTTGKPATPFDFGSGHVDPVSALDPGLVYDLNVDDYLGFFCALNYTSFQIKIAARRDFTCTKKYRLEDFNYPSFAVALETASGIGGGSNKPVTIEYNRVLTNVGTPGTYKASVVMESSSVKAVVEPEIITFKEVNEKKGYTVRFICDSMPSGTKEFGYLEWNDGKHRVKSPIAFSWT 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00389 695 CDD Peptidases_S8_3 65 507 IPR034197 -
Trre1g00389 695 SUPERFAMILY PA domain 327 393 IPR046450 -
Trre1g00389 695 Gene3D Peptidase S8/S53 domain 472 554 IPR036852 GO:0004252|GO:0006508
Trre1g00389 695 Pfam Peptidase inhibitor I9 8 68 IPR010259 -
Trre1g00389 695 ProSitePatterns Serine proteases, subtilase family, serine active site. 471 481 IPR023828 -
Trre1g00389 695 MobiDBLite consensus disorder prediction 158 180 - -
Trre1g00389 695 Pfam PA domain 344 416 IPR003137 -
Trre1g00389 695 Pfam Fibronectin type-III domain 586 691 IPR041469 -
Trre1g00389 695 Gene3D - 558 694 - -
Trre1g00389 695 FunFam Subtilisin-like protease SBT1.5 93 310 - -
Trre1g00389 695 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 68 IPR037045 -
Trre1g00389 695 Gene3D - 299 439 - -
Trre1g00389 695 PRINTS Subtilisin serine protease family (S8) signature 470 486 IPR015500 -
Trre1g00389 695 PRINTS Subtilisin serine protease family (S8) signature 91 110 IPR015500 -
Trre1g00389 695 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Trre1g00389 695 Gene3D Peptidase S8/S53 domain 93 471 IPR036852 GO:0004252|GO:0006508
Trre1g00389 695 FunFam subtilisin-like protease SBT1.5 299 439 - -
Trre1g00389 695 Pfam Subtilase family 92 532 IPR000209 GO:0006508|GO:0008236
Trre1g00389 695 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 691 IPR045051 -
Trre1g00389 695 CDD PA_subtilisin_like 305 432 - -
Trre1g00389 695 ProSiteProfiles Serine proteases, subtilase domain profile. 64 541 - -
Trre1g00389 695 SUPERFAMILY Subtilisin-like 67 545 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00389 Trre-Chr1 2767343 2769520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00389 1 695 Subtilisin-like Serine Gene Family AT5G67360 59.808 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00389 - - gmx:100793808 1127.85