Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00388 ATGAAGATTTTCAATTCTTTTCCAATTGTTCTATTGCTAATATTCTTTAGCAGACAAATAACAGTAGCACAAACAAAAACACCACAAACCAAAAACACATACATAATTCACATGGACAAATCAACCATGCCAGAAACATTCACCGATAATGATCACTTTAACTGGTTTGACACATCGCTAAAATCAGTATCCGAAACAGCAGAGATTCTCTACACTTATAAACACATAGCTCATGGATTCTCAACCAGATTAACAAACCAAGAAGCTGAAACACTTCTAAAACAACCAGGAATTCTCTCTGTTACCCCTGAACTCAGATACCAACTTCACACAACAAGAACACCAGAGTTTCTCGGATTACCGAAAACAAACACTTTGTTACCGAATTCAAATCAACAGAGTGATGTTATTATTGGTGTTCTTGACACTGGTATATGGCCAGAGCTAAAAAGCTTAGATGACACAGGACTTGGTCCAATACCAACTAGTTGGAAAGGCGAATGCGAAACCGGTAACAATCTCAATTCATCAAATTGCAACAGAAAACTGATTGGTGCAAGGTTTTTCTCAAAAGGGTATGAAGCAGCACTTGGTCCTATTGATGAAACAACAGAATCAAGATCAGCTAGAGATGATGATGGACATGGAAGTCATACCTTAACAACAGCAGGTGGTTCTGAAGTAGCAGAAGCTAGCTTATTTGGTTTAGCTTCTGGTACTGCTAGAGGCATGGCTACACAAGCGCGTGTCGCGGCATACAAAGTGTGTTGGCTTGGTGGCTGTTTGACTTCAGATATAGCTGCAGGAATCGATAAAGCTATTGAAGACGGTGTTAACATCTTATCGATGTCAATTGGTGGTAGCCAAACAGAATACTATAGAGACATCATTGCAATTGGTTCTTTCACAGCAATGTCTCATGGAATTCTAGTTTCTGCTTCAGCAGGAAATGGTGGACCGAGTGCTGATACCTTATCGAATGTAGCACCGTGGATAACAACGGTCGGAGCAGGAACAATTGATCGCGATTTTCCATCTTATATATCACTTGGAAATGGAAATAATTACACTGGTGCATCACTTTACAATGGAAAACCTTTACCTGATTCATTGCTACCACTTATTTATGCAGGTAATGCTACAAATTCCTCAGTTGGGTATCTTTGTATACCTGATTCATTAATAAGTTCAAAAGTTTCCGGCAAAATTGTGATATGTGAAAGAGGTGGAAACTCAAGAACTGAGAAGGGTCTAGTAGTAAAAACTGCTAGTGGAATTGGAATGATTTTGGTTAACAATGAAGAATATGGTGAAGAGTTAATTGCTGACCCTCATCTTCTTCCAGCAGCAACATTGGGTCAAAAATCAGGCACAATTCTAAAAGACTATGTTTTTGCTACGAAAAATCCAACAGCTAAAATTGTTTTTGGTGGCACACACTTGCAAGTTCAACCTTCACCAGTGGTAGCAGCATTCAGTTCAAGAGGACCAAACGCTTTAACACCAAAGATTCTTAAACCGGATTTAATAGCTCCAGGTGTAAACATATTAGCCGGTTGGTCCGGTTCAGTTGGACCAACCGGTTTAACGGCTGACAAAAGGTACGTGAGTTTCAATATTATATCAGGAACTTCAATGTCGTGTCCTCACGTGAGTGGTTTAGCTGCAATAGTTAAAGGAGCTCACCCTGAATGGAGTCCTGCTTCTGTACGGTCAGCACTAATGACCACCGCATACACCTCATACAAAACCGGACAAACAATCCAAGATGTTACAACTGGGAAACCGGCTACTCCCTTTGATTTTGGATCGGGACACGTGGATCCTGTATCCGCCCTTGATCCTGGTCTTGTTTATGATCTCAACGTCGATGATTATCTTGGTTTTTTTTGTGCTTTAAACTACACGTCATTTCAAATCAAAATTGCTGCTAGAAGAGATTTCACGTGTACCAAGAAATATAGGCTTGAAGATTTTAATTATCCTTCTTTTGCTGTTGCTTTGGAAACTGCTTCGGGAATTGGTGGTGGTTCGAATAAACCGGTAACAATTGAATATAATAGGGTTCTTACAAATGTTGGAACTCCGGGAACATATAAAGCTTCTGTTGTGATGGAATCTTCGTCTGTGAAGGCTGTGGTTGAACCAGAGATTATTACTTTTAAGGAAGTGAATGAGAAGAAGGGTTATACGGTCCGGTTTATTTGTGATTCGATGCCTTCCGGAACGAAGGAATTTGGTTATTTGGAATGGAATGATGGGAAGCATAGGGTTAAAAGTCCAATTGCTTTTAGTTGGACTTGA 2304 0.3984 MKIFNSFPIVLLLIFFSRQITVAQTKTPQTKNTYIIHMDKSTMPETFTDNDHFNWFDTSLKSVSETAEILYTYKHIAHGFSTRLTNQEAETLLKQPGILSVTPELRYQLHTTRTPEFLGLPKTNTLLPNSNQQSDVIIGVLDTGIWPELKSLDDTGLGPIPTSWKGECETGNNLNSSNCNRKLIGARFFSKGYEAALGPIDETTESRSARDDDGHGSHTLTTAGGSEVAEASLFGLASGTARGMATQARVAAYKVCWLGGCLTSDIAAGIDKAIEDGVNILSMSIGGSQTEYYRDIIAIGSFTAMSHGILVSASAGNGGPSADTLSNVAPWITTVGAGTIDRDFPSYISLGNGNNYTGASLYNGKPLPDSLLPLIYAGNATNSSVGYLCIPDSLISSKVSGKIVICERGGNSRTEKGLVVKTASGIGMILVNNEEYGEELIADPHLLPAATLGQKSGTILKDYVFATKNPTAKIVFGGTHLQVQPSPVVAAFSSRGPNALTPKILKPDLIAPGVNILAGWSGSVGPTGLTADKRYVSFNIISGTSMSCPHVSGLAAIVKGAHPEWSPASVRSALMTTAYTSYKTGQTIQDVTTGKPATPFDFGSGHVDPVSALDPGLVYDLNVDDYLGFFCALNYTSFQIKIAARRDFTCTKKYRLEDFNYPSFAVALETASGIGGGSNKPVTIEYNRVLTNVGTPGTYKASVVMESSSVKAVVEPEIITFKEVNEKKGYTVRFICDSMPSGTKEFGYLEWNDGKHRVKSPIAFSWT 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00388 767 FunFam Subtilisin-like protease SBT1.9 22 110 - -
Trre1g00388 767 Gene3D - 341 481 - -
Trre1g00388 767 SUPERFAMILY PA domain 369 435 IPR046450 -
Trre1g00388 767 Pfam Subtilase family 134 604 IPR000209 GO:0006508|GO:0008236
Trre1g00388 767 CDD PA_subtilisin_like 347 474 - -
Trre1g00388 767 FunFam subtilisin-like protease SBT1.5 341 481 - -
Trre1g00388 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 763 IPR045051 -
Trre1g00388 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 110 IPR037045 -
Trre1g00388 767 Pfam PA domain 386 458 IPR003137 -
Trre1g00388 767 Gene3D Peptidase S8/S53 domain 135 626 IPR036852 GO:0004252|GO:0006508
Trre1g00388 767 Pfam Fibronectin type-III domain 658 763 IPR041469 -
Trre1g00388 767 Pfam Peptidase inhibitor I9 33 110 IPR010259 -
Trre1g00388 767 FunFam Subtilisin-like protease SBT1.5 135 352 - -
Trre1g00388 767 Gene3D - 630 766 - -
Trre1g00388 767 SUPERFAMILY Subtilisin-like 109 617 IPR036852 GO:0004252|GO:0006508
Trre1g00388 767 CDD Peptidases_S8_3 107 579 IPR034197 -
Trre1g00388 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Trre1g00388 767 MobiDBLite consensus disorder prediction 200 222 - -
Trre1g00388 767 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Trre1g00388 767 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Trre1g00388 767 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Trre1g00388 767 ProSiteProfiles Serine proteases, subtilase domain profile. 106 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00388 Trre-Chr1 2767343 2769646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00388 31 767 Subtilisin-like Serine Gene Family AT5G67360 62.618 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00388 - - gmx:100793808 1226.46